Methanosarcina thermophila TM-1: MSTHT_2007
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Entry
MSTHT_2007 CDS
T03892
Name
(GenBank) Transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
mthr
Methanosarcina thermophila TM-1
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mthr03000
]
MSTHT_2007
Transcription factors [BR:
mthr03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSTHT_2007
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
HTH_IclR
Regulator_TrmB
HTH_27
DnaD_N
HTH_34
Rrf2
IBP39
HTH_20
F-93_WHD
PadR
GntR
ULD
HTH_46
Penicillinase_R
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AKB13765
UniProt:
A0A0E3NCM1
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All DBs
Position
complement(2453645..2454256)
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AA seq
203 aa
AA seq
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MFPQINPQLIHNLEKLGLTENEAKAYVGLVSLREATAREIHELTNVPRAKIYEILKVLAK
KGFLEVRQGSPTYFRAVDPREVIGKIKDEFINCAIETLDQLNELSYELPKTSPVWCIQSD
WGIKNRIREILDRVKEELIIFSSSPEFLKEFEPELKRLEKTCKLTVIVDKPERFSLLPFE
FKKTTEEFMDFLDNIIIDGVRYK
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtttccacaaattaatcctcagttaattcacaaccttgagaagcttgggctaaccgaa
aatgaggcaaaagcctatgttgggcttgtaagtttgagggaagctacagcccgtgagatc
catgagcttacaaatgtgccaagagccaaaatatatgaaattctcaaagtacttgctaaa
aaaggctttcttgaagtaaggcagggatctcctacctatttccgggcagtcgatccaaga
gaggtgatcggaaagataaaagacgaatttattaattgtgcaatcgagacgcttgaccag
ctcaatgaactgagctatgaactcccaaaaacttctcctgtatggtgcatccagagtgat
tgggggataaagaacagaatacgtgaaatcctggacagagtaaaagaagaacttattatt
ttctcgtccagccctgagtttctaaaggagtttgaaccggaactaaaaagactggagaaa
acttgcaaactgactgttattgttgataaaccggaaaggttcagtttgctgccttttgaa
ttcaaaaaaaccacagaggaattcatggattttctggataatattataattgatggtgtc
aggtataaatga
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