Methanosarcina thermophila TM-1: MSTHT_2121
Help
Entry
MSTHT_2121 CDS
T03892
Name
(GenBank) Geranylfarnesyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mthr
Methanosarcina thermophila TM-1
Pathway
mthr00900
Terpenoid backbone biosynthesis
mthr01100
Metabolic pathways
mthr01110
Biosynthesis of secondary metabolites
Module
mthr_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MSTHT_2121
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
MSTHT_2121
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mthr01006
]
MSTHT_2121
Enzymes [BR:
mthr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MSTHT_2121
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MSTHT_2121
2.5.1.29 geranylgeranyl diphosphate synthase
MSTHT_2121
Prenyltransferases [BR:
mthr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MSTHT_2121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AKB13879
UniProt:
A0A0E3H9C8
LinkDB
All DBs
Position
2588997..2589962
Genome browser
AA seq
321 aa
AA seq
DB search
MTLIDEIKKRSVHVDDAINELLPVAPPEELYKASRYLVDAGGKRLRPAVLILAAEAVGSD
LKSVLPAAVAVELVHNFTLIHDDIMDRDDIRRGRPAVHKIWGEAGAILAGDTLYSKAFEI
LSKVENEPVRILKCMDILSKTCTEICEGQWLDMDFERREKVSKAEYIEMVEKKTSVLYAA
AAKIGALLGGASDEVAEALSEYGRLIGIGFQMYDDVLDMVAPEEVLGKVRGSDLMEGKHT
LIIIDAFEKGVKLDIFGKGEATQEETDEAVRILTECGSIDYVKNLAISYINEGKAKLDVL
QDCPEKDLLLQIADYMITRKY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgattgatgagattaaaaaaagaagtgtccatgttgatgacgcgattaatgaa
ctgttgccggtagccccccccgaggagttgtataaagcttctcgctacctggtagatgcg
ggaggaaaacgcctccgtcccgcagttcttattctggcagccgaagctgtaggctcagat
ctaaaatcggtgctgcctgcagcagtagccgtggagcttgtacataatttcactctgatc
catgatgatataatggatagagatgatattcgcagagggagacccgcagtccataaaata
tggggcgaagccggggcaattcttgcgggcgacacgctttattccaaagcttttgagatc
ctctcaaaagtcgagaatgaacctgtaaggattttaaaatgcatggatatcctctcaaag
acctgtactgaaatctgcgaagggcagtggcttgatatggactttgagagaagagagaag
gtttctaaagccgaatacattgagatggtggaaaagaaaacctcggttctctatgccgct
gcagccaagatcggagcccttcttggaggagcctctgatgaagtcgctgaggctttatcc
gaatatggacgccttataggaattggcttccagatgtatgacgatgttctggatatggtc
gcccccgaggaagttcttgggaaagtaagaggtagcgaccttatggaaggaaagcacact
cttatcataatcgacgctttcgagaaaggtgtgaaactggacattttcgggaaaggggaa
gcaactcaggaagaaaccgacgaggctgtccgtatcttaacagagtgtggatcaattgat
tatgtgaagaatcttgcaatttcatatatcaacgaaggcaaagcaaagctggacgttctg
caggactgcccagaaaaagatctgctccttcagatcgccgattatatgatcacaagaaaa
tattga
DBGET
integrated database retrieval system
