KEGG   Methanosarcina thermophila TM-1: MSTHT_2124
Entry
MSTHT_2124        CDS       T03892                                 
Name
(GenBank) Transcription initiation factor B
  KO
K03124  transcription initiation factor TFIIB
Organism
mthr  Methanosarcina thermophila TM-1
Pathway
mthr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mthr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MSTHT_2124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mthr03021]
    MSTHT_2124
Transcription machinery [BR:mthr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     MSTHT_2124
 Prokaryotic type
  Archaeal type
    TFB
     MSTHT_2124
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Cas12f1-like_TNB Lar_restr_allev Sigma70_r4 Zn_ribbon_LysW RPA_interact_C Trm112p Zn_ribbon_IS1595 Zn_ribbon_SprT DUF7577 HTH_Tnp_ISL3 HTH_AsnC-type Zn_ribbon_PaaD BRF2-like_C_cyclin_rpt A2L_zn_ribbon FtrD-like Methyltransf_13 zf-ChsH2 Ribosomal_S27e
Other DBs
NCBI-ProteinID: AKB13882
UniProt: A0A0E3ND68
LinkDB
Position
2593753..2594766
AA seq 337 aa
MVEIERVRYSDTLEREKIRAMIKARKEKQKEQSFETEKAVCPECGSRNLVHDYERAELVC
GDCGLVIDADFVDEGPEWRAFDHDQRMKRSRVGAPMTYTIHDKGLSTMIDWRNRDSYGKS
ISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRTVRETAAVVYRKA
VDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIEEVSRVSRKEIGRTYRFISRELALK
LMPTSPIDYVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILC
GERRTQREVADVAGVTEVTIRNRYKELAEELDIEIIL
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggtagaaatcgaaagggttcgctattcggacactcttgaaagggaaaaaatacgtgcc
atgatcaaagctcgcaaagagaagcaaaaagagcaaagttttgagacggaaaaggcagtg
tgtccagaatgcggtagcagaaacctcgttcacgactacgagcgtgccgagcttgtgtgt
ggggactgcggacttgtcattgatgccgattttgtagatgagggcccagaatggcgagct
ttcgatcatgatcagcgtatgaagcgttcccgtgtgggtgcgccaatgacatacacaatc
cacgacaaagggctttccacaatgattgactggagaaaccgtgattcctacgggaagtca
atttcttccaaaaaccgtgctcagctctatcgtttaagaaaatggcagcgtagaatccgc
gtaagtaacgcaactgaaagaaacctcgcatttgcactatccgaactggacagaatggct
tctgcccttggtctccctagaacggtcagggaaactgcagcagtcgtctacagaaaagct
gtggataaaaatcttatccgtggaagaagcattgagggtgtcgccgcagctgccctttat
gctgcctgccgtcagtgcagcgttccaagaacccttgatgagatcgaagaggtatccagg
gtcagccggaaagagatcggaagaacttaccgctttatttccagagaattggcactgaaa
cttatgcctacctcaccaattgattatgtcccaaggttctgttctggccttaaccttaaa
ggagaagtccagtccaagagcgttgagatcctgaggcaggcttccgagaaggaactcaca
agtggaaggggtcccacaggagttgctgcagctgcaatctatattgcatccattctctgc
ggtgaacgcagaacccagcgtgaagttgcagatgtagccggcgtaacagaagttaccatc
cgaaacaggtacaaagaacttgcagaagaactggatattgaaattatcctctaa

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