Methanosarcina thermophila TM-1: MSTHT_2205
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Entry
MSTHT_2205 CDS
T03892
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mthr
Methanosarcina thermophila TM-1
Pathway
mthr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSTHT_2205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthr03019
]
MSTHT_2205
03110 Chaperones and folding catalysts [BR:
mthr03110
]
MSTHT_2205
03029 Mitochondrial biogenesis [BR:
mthr03029
]
MSTHT_2205
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mthr04147
]
MSTHT_2205
Enzymes [BR:
mthr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MSTHT_2205
Messenger RNA biogenesis [BR:
mthr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSTHT_2205
Chaperones and folding catalysts [BR:
mthr03110
]
Heat shock proteins
HSP60 / Chaperonin
MSTHT_2205
Mitochondrial biogenesis [BR:
mthr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MSTHT_2205
Exosome [BR:
mthr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSTHT_2205
Exosomal proteins of other body fluids (saliva and urine)
MSTHT_2205
Exosomal proteins of breast cancer cells
MSTHT_2205
Exosomal proteins of colorectal cancer cells
MSTHT_2205
Exosomal proteins of bladder cancer cells
MSTHT_2205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AKB13963
UniProt:
A0A0E3NCV6
LinkDB
All DBs
Position
2689181..2690791
Genome browser
AA seq
536 aa
AA seq
DB search
MAPKQIMFDENARKAILNGVDKVANTVKITLGPRGRYVVLDKTTKPVVTNDGVTIAKEIE
LRDKFENMGAKLVKEVASKTQDTTGDGTTTATLLAQSMIREGLKNISAGANPIEVKKGIE
IATEKVVDYLKSKSVEVKGKDKVLQVATISANNDEEIGSLISDAMERVGYNGVITVEDSK
TMDTSLDVVEGMQFDRGFVSPYMVTDSEKMICEFEDPYILITDKKINSMKQIVPVLEKVA
SEGRSLLIIADDVDGDAQAALILNIIRGALKVCAVKAPGFGNEKKDMLEDIAILTGGQVI
SEDKGMKLEEFQDYMLGSARKVTVDNNKTTIVEGKGDKKKIDERVKLIEAQINISDSEYR
KTELRKRQAKLAGGVAVIKVGAATETELKEKKMRIDDALNATKAAVEEGVVTGGGISLFR
AAATLDSLKFDDDREVGVNIVKRAIEEPVRQIAANAGREGAEVVATIKAESNELYGYNAK
KDIFEDLFEAGVIDPTKVVRSALQNAASIAGMVLTTEALVTEFDEEKDEKTAAIII
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaagcagataatgtttgacgagaatgcgagaaaggcaatcttaaacggtgtg
gacaaagttgcaaataccgtcaagatcactctgggaccgaggggacgttatgttgtactg
gacaaaactacaaaacctgtggtcacaaacgacggagtaactattgcaaaggaaatcgaa
cttcgcgataagttcgagaatatgggagctaaacttgttaaagaagtcgcttccaaaacc
caggataccaccggcgatggaacaactactgcaacccttcttgctcagagcatgattagg
gaaggcctgaaaaacatcagtgccggagcaaacccgatagaagtcaagaaaggcatagag
attgcaacagaaaaggttgttgactatctcaagagtaagagcgttgaagtaaaaggcaag
gataaagtcttacaggtagccacgatttctgcaaacaatgatgaagagataggcagtttg
atttccgatgccatggagagagtcggctacaatggggtaattacggttgaggattccaaa
acaatggacacaagcctggatgttgtggaaggtatgcaattcgaccggggctttgtctct
ccatacatggtaaccgattcagagaaaatgatctgtgagttcgaggatccttacatcctt
atcacggacaagaaaatcaacagcatgaagcagattgtccccgtacttgaaaaagtcgcc
tctgaaggtcgttctttacttattattgccgatgacgttgatggagatgcccaggctgcc
ctgatccttaatatcatccgcggagcattgaaagtctgcgctgtcaaagctccaggtttc
ggaaatgagaagaaagatatgcttgaggatattgccatattgaccggcgggcaggtaatt
agcgaagacaagggcatgaagcttgaggaattccaggattatatgcttggaagtgcaagg
aaagtcactgttgacaacaacaagactactattgtggaaggcaagggtgacaagaaaaag
attgatgagagggtcaaactcatcgaagcccagattaatatctcagactcagagtacagg
aagactgaactcagaaagcgccaggcaaagttagcaggcggagtcgcagtaatcaaagtc
ggagctgcaaccgaaaccgaactgaaagagaaaaagatgagaattgacgatgctctcaat
gccacaaaagctgcagttgaagaaggcgtagttaccgggggcggaataagcctgttccgt
gcagctgctactctggattccctgaaattcgatgacgacagggaggtaggtgtaaatata
gtcaagagggctatcgaagagccggtacgccagatcgctgcaaatgcaggaagggaagga
gctgaggtggttgcaaccataaaagctgaatcaaacgaactgtacgggtacaatgcaaag
aaagacatctttgaagatcttttcgaagcaggtgtcatcgaccccacaaaagtagtcaga
agcgctcttcagaacgccgcctcaattgcaggaatggtactcacaaccgaagcccttgtc
actgaattcgacgaagaaaaggatgaaaagaccgctgcaattattatctaa
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