Methanosarcina thermophila TM-1: MSTHT_2416
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Entry
MSTHT_2416 CDS
T03892
Name
(GenBank) SSU ribosomal protein S27Ae
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
mthr
Methanosarcina thermophila TM-1
Pathway
mthr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
MSTHT_2416
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MSTHT_2416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mthr03011
]
MSTHT_2416
04121 Ubiquitin system [BR:
mthr04121
]
MSTHT_2416
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mthr04147
]
MSTHT_2416
Ribosome [BR:
mthr03011
]
Ribosomal proteins
Eukaryotes
Small subunit
MSTHT_2416
Archaea
MSTHT_2416
Ubiquitin system [BR:
mthr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
MSTHT_2416
Exosome [BR:
mthr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSTHT_2416
Exosomal proteins of colorectal cancer cells
MSTHT_2416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S27
Zn_ribbon_Nudix
Ribosomal_L37e
Rcat_RNF216
Zn_Ribbon_TF
Zn_ribbon_RPB9
Zn_Ribbon_1
DUF6671
Cas12f1-like_TNB
DUF1451
Zn_ribbon_NUD
Zn_ribbon_NOB1
Zn_ribbon_13
Zn_ribbon_IS1595
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
AKB14174
UniProt:
A0A0E3H9I7
LinkDB
All DBs
Position
complement(2937431..2937580)
Genome browser
AA seq
49 aa
AA seq
DB search
MAVKDYYKVQGDSVTRIKQFCPRCGPGTFLADHKNRLACGKCGYTEFKK
NT seq
150 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaaagattactataaagtccagggcgactccgtaactagaataaaacagttc
tgccccaggtgcggaccaggtacattcctcgcggaccacaaaaaccgcctcgcctgcgga
aaatgcggatataccgaattcaagaaataa
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