KEGG   Methanosarcina thermophila TM-1: MSTHT_2484
Entry
MSTHT_2484        CDS       T03892                                 
Name
(GenBank) Transcriptional regulator
  KO
K07725  CRISPR-associated protein Csa3
Organism
mthr  Methanosarcina thermophila TM-1
Brite
KEGG Orthology (KO) [BR:mthr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mthr03000]
    MSTHT_2484
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mthr02048]
    MSTHT_2484
Transcription factors [BR:mthr03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    MSTHT_2484
Prokaryotic defense system [BR:mthr02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    MSTHT_2484
SSDB
Motif
Pfam: HTH_5 HTH_24 HTH_45 TrmB HTH_IclR HTH_20 wHTH-PRTase_assc MarR_2 HTH_36 HTH_Crp_2 FCaBP_EF-hand Fe_dep_repress HTH_11 Tra_M MarR Rrf2 HTH_10 NirdL-like_HTH PadR
Other DBs
NCBI-ProteinID: AKB14242
UniProt: A0A0E3NEP5
LinkDB
Position
complement(3020524..3020853)
AA seq 109 aa
MSGGRKPQAFGALFGAYARNDMVQRVVYVTEEDSFMIDFPVLSFNLSETKKLILEEIQKG
VSSVTKIAATAGISKGMTYNHLRKLKAMGYIADGESGYIITDAGRIASI
NT seq 330 nt   +upstreamnt  +downstreamnt
gtgtcaggcgggcggaagccgcaggcttttggagcacttttcggggcgtatgcaaggaat
gatatggtgcagagagttgtatatgtgaccgaagaggatagttttatgattgattttccg
gtgctgagtttcaatctgtcggaaacaaaaaaattgatactcgaagagatccagaaagga
gtatcctcggttaccaagatagctgcaactgccggaatctcgaagggcatgacttacaac
caccttcggaaactcaaagcaatgggttacatagccgatggggaaagcggatacattata
accgatgccggaaggatcgcttcgatctga

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