Methanosarcina thermophila TM-1: MSTHT_2493
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Entry
MSTHT_2493 CDS
T03892
Name
(GenBank) CRISPR-associated RecB family exonuclease Cas4b
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
mthr
Methanosarcina thermophila TM-1
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
mthr02048
]
MSTHT_2493
Enzymes [BR:
mthr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
MSTHT_2493
Prokaryotic defense system [BR:
mthr02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
MSTHT_2493
Subtype I-B factors
MSTHT_2493
Subtype I-C factors
MSTHT_2493
Subtype I-D factors
MSTHT_2493
Type II CRISPR-Cas system
Subtype II-B factors
MSTHT_2493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AKB14251
UniProt:
A0A0E3NG42
LinkDB
All DBs
Position
3029058..3029747
Genome browser
AA seq
229 aa
AA seq
DB search
MTKSEPIIVEDGLRAGTQIDVESDIGGDDSIYAETDFGTIIRISDVLEYLFCSRFIYYMY
CLDIPQHEEKRFKVLKGREVHETRKLTNRDYLRRSLDCIRKESNVFIASKKRHIKGIVDE
VLFLEDGTAAPLEYKFAEYKEKVFKTYKFQLVLQALLIRENYNIEVNRAYICFTRSNSLV
KEIEITTSDFKKAEKIIQEILDIIQKGLYPKTSRSSRKCVDCCYRNICV
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatctgagcccataatagttgaggatggtctgagagcaggcactcaaatagat
gttgaaagcgacatcggaggcgatgacagtatatatgctgaaacggatttcggaacaata
atcagaatttcagacgtgcttgagtatttgttttgttctcgtttcatttattatatgtac
tgtcttgatattccgcagcacgaagaaaaaaggtttaaagtcttgaaaggtcgcgaagtt
catgagaccagaaagcttacaaacagggactacctccggagaagtctggattgcatcagg
aaagaaagcaatgtttttattgcctcaaaaaaacgccatataaaaggaattgttgatgaa
gtcctgtttctggaagacggaaccgccgctccccttgaatacaaatttgccgaatacaaa
gagaaggtctttaaaacctataagtttcaactcgtcttgcaggcgcttctgatccgggaa
aactacaatattgaagttaatcgcgcatatatttgttttacacgcagcaacagccttgtc
aaagaaatagaaatcacaacctctgatttcaaaaaagccgaaaagattatacaggaaatc
cttgatataattcaaaaaggcttatatccaaagacctctagatcttctagaaagtgcgta
gattgctgttaccgtaatatctgcgtatga
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