KEGG   Neomoorella thermoacetica DSM 2955: MOTHA_c11180
Entry
MOTHA_c11180      CDS       T06429                                 
Symbol
rnjA
Name
(GenBank) ribonuclease J 1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mthz  Neomoorella thermoacetica DSM 2955
Pathway
mthz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mthz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MOTHA_c11180 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mthz03019]
    MOTHA_c11180 (rnjA)
Messenger RNA biogenesis [BR:mthz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MOTHA_c11180 (rnjA)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 Shikimate_DH
Other DBs
NCBI-ProteinID: AKX96473
UniProt: A0AAC9HHF5
LinkDB
Position
1093520..1095187
AA seq 555 aa
MAENERKVSLIPLGGLGEIGKNMMAIRYGNSILVIDCGLTFPEDELLGVDVVIPDYTYLL
ENRQMVKGIIVTHGHEDHIGALPYVLKDLNVPVYGTKLTLALIQAKLKEQGNFNGVRLQQ
VKPRDTLKIGPFRVEFIHVSHSIADTVALAIHTPVGTIVHTSDFKIDYTPIDGEVFDFYK
FAELGEKGVLVLMSDSTNVERPGFTMSERVVGGTFDEVFRRARERIIIASFASNIHRVQQ
IISTAYKYNRKVAVVGRSMVNVVNIAQEIGYLNIPEGTLVELSELAHLPKNQTVIISTGS
QGEPMSALTRIARNDHRQIEIVPGDTVIISALPIPGNEKLVARTVDQLFKQGADVYHEAV
EGVHVSGHASQEELKLVLSLVKPKFFVPVHGEYRMLIKHARLAEELGIPPENIFVAENGQ
VMEFTREEGNFNGRVTAGRLLIDGLGVGDVGNIVLRDRKQLAQDGLLIVVLTLSKETGSV
VAGPDIISRGFVYVRESEELLDEAKERVRQALDKCSERKVNDWSTIKGNIRDNLSKFLYE
KTRRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggccgaaaatgagcgtaaggtttccttgatccccctaggtggcctcggggaaatcggc
aagaacatgatggcgatcaggtacggaaacagcatactggtcatcgattgtggcttgacc
tttcccgaggatgaattgctgggtgtcgatgtggtcatcccggattacacctacctgcta
gaaaaccggcaaatggtaaaggggattatagtcacccacggccatgaagatcatatcggg
gccctgccctatgttttaaaggatctaaatgtaccggtttatggaaccaaactaaccctg
gccctgattcaggctaaactgaaggaacagggtaactttaacggtgtccggctgcagcag
gtgaagcccagggatactttaaaaatcggccctttcagggttgagtttattcacgtcagc
cattccattgccgatactgtcgccctggctattcatacgccggtgggcaccatcgtccac
accagcgattttaaaatcgattatacaccaatcgacggggaagtctttgatttctataag
tttgccgagctgggtgaaaagggcgtcctggtgctaatgtcggacagcaccaatgttgaa
cgcccgggctttaccatgtccgaacgcgtagtcggtgggacctttgatgaggtgtttcgc
cgggcacgggaacggataattatcgccagcttcgcatccaatatccaccgggtccagcag
ataatatctacggcttacaagtacaatcgcaaagtagctgtggtaggccgcagcatggta
aacgtggtcaatattgcccaggagattgggtacctgaatatcccggaaggtactctggtg
gagctgagcgaactggcgcacttgcctaaaaaccagacggtaatcatatccaccggcagc
cagggggagccaatgtcggccctgacccggattgcccggaatgatcaccgccagattgaa
attgttccaggggatacggtgattatttccgccttgcccatcccgggcaatgaaaaactg
gtggcgcgaacggtagaccagctgtttaaacagggtgccgatgtctatcatgaagccgtt
gaaggggttcacgtttccggtcacgccagtcaggaggaattgaaactggttctcagcctg
gtcaagcccaagtttttcgtccccgttcacggcgagtaccgcatgttgattaaacacgcc
cgcctggccgaagagctgggaatacccccggaaaacatttttgtggctgagaacggccag
gtaatggagtttaccagggaggaaggtaactttaatggccgcgtcaccgccggtcgtctc
ctgattgacggcctgggagtgggtgatgtgggcaatatcgtcctgcgggatcgcaaacaa
ctggcccaggacggcctgctcattgtggtccttaccctgagtaaagaaaccggaagtgta
gtcgccgggccggatattatctcgcggggatttgtctacgtacgcgagagtgaggaactg
ctggatgaggccaaagaaagggtccgccaggcccttgataagtgtagtgaacgcaaggta
aatgactggtcaaccattaaaggcaatattcgcgataacctgagtaaattcctctacgag
aaaaccaggcggcgccccatgatcctgcctattattatggaggtgtag

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