Neomoorella thermoacetica DSM 2955: MOTHA_c11180
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Entry
MOTHA_c11180 CDS
T06429
Symbol
rnjA
Name
(GenBank) ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mthz
Neomoorella thermoacetica DSM 2955
Pathway
mthz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOTHA_c11180 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthz03019
]
MOTHA_c11180 (rnjA)
Messenger RNA biogenesis [BR:
mthz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MOTHA_c11180 (rnjA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AKX96473
UniProt:
A0AAC9HHF5
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Position
1093520..1095187
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AA seq
555 aa
AA seq
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MAENERKVSLIPLGGLGEIGKNMMAIRYGNSILVIDCGLTFPEDELLGVDVVIPDYTYLL
ENRQMVKGIIVTHGHEDHIGALPYVLKDLNVPVYGTKLTLALIQAKLKEQGNFNGVRLQQ
VKPRDTLKIGPFRVEFIHVSHSIADTVALAIHTPVGTIVHTSDFKIDYTPIDGEVFDFYK
FAELGEKGVLVLMSDSTNVERPGFTMSERVVGGTFDEVFRRARERIIIASFASNIHRVQQ
IISTAYKYNRKVAVVGRSMVNVVNIAQEIGYLNIPEGTLVELSELAHLPKNQTVIISTGS
QGEPMSALTRIARNDHRQIEIVPGDTVIISALPIPGNEKLVARTVDQLFKQGADVYHEAV
EGVHVSGHASQEELKLVLSLVKPKFFVPVHGEYRMLIKHARLAEELGIPPENIFVAENGQ
VMEFTREEGNFNGRVTAGRLLIDGLGVGDVGNIVLRDRKQLAQDGLLIVVLTLSKETGSV
VAGPDIISRGFVYVRESEELLDEAKERVRQALDKCSERKVNDWSTIKGNIRDNLSKFLYE
KTRRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaatgagcgtaaggtttccttgatccccctaggtggcctcggggaaatcggc
aagaacatgatggcgatcaggtacggaaacagcatactggtcatcgattgtggcttgacc
tttcccgaggatgaattgctgggtgtcgatgtggtcatcccggattacacctacctgcta
gaaaaccggcaaatggtaaaggggattatagtcacccacggccatgaagatcatatcggg
gccctgccctatgttttaaaggatctaaatgtaccggtttatggaaccaaactaaccctg
gccctgattcaggctaaactgaaggaacagggtaactttaacggtgtccggctgcagcag
gtgaagcccagggatactttaaaaatcggccctttcagggttgagtttattcacgtcagc
cattccattgccgatactgtcgccctggctattcatacgccggtgggcaccatcgtccac
accagcgattttaaaatcgattatacaccaatcgacggggaagtctttgatttctataag
tttgccgagctgggtgaaaagggcgtcctggtgctaatgtcggacagcaccaatgttgaa
cgcccgggctttaccatgtccgaacgcgtagtcggtgggacctttgatgaggtgtttcgc
cgggcacgggaacggataattatcgccagcttcgcatccaatatccaccgggtccagcag
ataatatctacggcttacaagtacaatcgcaaagtagctgtggtaggccgcagcatggta
aacgtggtcaatattgcccaggagattgggtacctgaatatcccggaaggtactctggtg
gagctgagcgaactggcgcacttgcctaaaaaccagacggtaatcatatccaccggcagc
cagggggagccaatgtcggccctgacccggattgcccggaatgatcaccgccagattgaa
attgttccaggggatacggtgattatttccgccttgcccatcccgggcaatgaaaaactg
gtggcgcgaacggtagaccagctgtttaaacagggtgccgatgtctatcatgaagccgtt
gaaggggttcacgtttccggtcacgccagtcaggaggaattgaaactggttctcagcctg
gtcaagcccaagtttttcgtccccgttcacggcgagtaccgcatgttgattaaacacgcc
cgcctggccgaagagctgggaatacccccggaaaacatttttgtggctgagaacggccag
gtaatggagtttaccagggaggaaggtaactttaatggccgcgtcaccgccggtcgtctc
ctgattgacggcctgggagtgggtgatgtgggcaatatcgtcctgcgggatcgcaaacaa
ctggcccaggacggcctgctcattgtggtccttaccctgagtaaagaaaccggaagtgta
gtcgccgggccggatattatctcgcggggatttgtctacgtacgcgagagtgaggaactg
ctggatgaggccaaagaaagggtccgccaggcccttgataagtgtagtgaacgcaaggta
aatgactggtcaaccattaaaggcaatattcgcgataacctgagtaaattcctctacgag
aaaaccaggcggcgccccatgatcctgcctattattatggaggtgtag
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