Neomoorella thermoacetica DSM 2955: MOTHA_c19840
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Entry
MOTHA_c19840 CDS
T06429
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mthz
Neomoorella thermoacetica DSM 2955
Pathway
mthz03030
DNA replication
mthz03430
Mismatch repair
mthz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mthz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MOTHA_c19840 (dnaE)
03430 Mismatch repair
MOTHA_c19840 (dnaE)
03440 Homologous recombination
MOTHA_c19840 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mthz03032
]
MOTHA_c19840 (dnaE)
03400 DNA repair and recombination proteins [BR:
mthz03400
]
MOTHA_c19840 (dnaE)
Enzymes [BR:
mthz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MOTHA_c19840 (dnaE)
DNA replication proteins [BR:
mthz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MOTHA_c19840 (dnaE)
DNA repair and recombination proteins [BR:
mthz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MOTHA_c19840 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AKX97321
UniProt:
A0A1J5NPX8
LinkDB
All DBs
Position
complement(1927893..1931363)
Genome browser
AA seq
1156 aa
AA seq
DB search
MKSFVHLHVHSEYSLLDGAGRIKDLVRAAGEMGMPALALTDHGVMYGAVEFYKAAREQGI
KPIIGCEVYVAPRSRHDREPHRDDYQYHLVLLATDATGYRNLTALVSAAFLEGFYYKPRV
DRELLSRHSQGLIALSACLAGEVPAHLLKNREDAAYEAATWLREVFGPENFYLELQDQGL
PEQRQLNRRLVDLAARLKIPLVATNDVHYIRQDQARAHDVLLCIQTGKTLDDPNRLRFPT
AQFYLKSPAEMDNLFREVPSALANTLAIAERCHFDFTFGRLHLPAYQVPAGEDAASYLRR
LSYEGLKRRYPHDDGTARQRLEYELGIIEQMGYPGYFLIVWDMVNFARRRGIPVGPGRGS
AAGSLVAYCLGITSIDPLRYNLLFERFLNPERVSMPDIDMDFCFERRDEVIQYVLEKYGR
DHVAQIITFGTMAARAAVRDVGRVLGLPLGEVDRIAKMVPMELGITLERALATSPDLKES
YEGNREVRELLDTARAIEGMPRHASIHAAGIVITREPLIHYLPLQKTGDAVTTQYPMQAV
EELGLLKMDLLGLRTLTVIGHAREAIRRNHGRELDLESLPLDDRPTYQLLASGETSGIFQ
LESSGMRAILKELKPERFEDIIALVALYRPGPLGSGMVEDFIKRKHGVTPISYLHPALEP
ILKDTYGVILYQEQVMRIASELAGFTLGQADLLRRAMGKKKPEVLAAQRDRFLAGAEAKA
IPRDVAQKIFELMEYFAGYGFNASHSAAYALVAYQTAYLKAHYPAELMGALLSSVAEHLD
KMEPYLAECQRLGIAVLPPDVNESGVDFTVTGRQIRFGLAAVKNAGRAAALAIIAAREAG
GPFTSLLDFCRRVDSRQANKRVVESLIRCGAFNSINPNRRQLLAGLDECLEVAARRQEDR
RSGQVSLMDLVPEEVNDPPLPQVTDFSRADILAMEKELLGFYLSGHPLEPYAPVLKKLTS
HSLADLAEIADGSQVTIGGLVSGLRRLVTRKGDPMAVLTLEDFSGQVEAVLFPRMYSQVR
SWLAPDRAVLVQGQVDKQEEGVQVLANLVRPLAPEAGGGDRTLPPPAGTHGTLPEARQGG
GRLYLKLSSEGQLTALRDTLAAHPGPCQVYLYLADSRRTIALHRRYWIEPVPELMASLAG
LLGGYDKIKLVQENRI
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttcgtccacctccatgtccacagtgaatacagcctcctggatggagccggc
cgcatcaaggatctggtccgggccgccggggaaatgggtatgcccgccctggccctcacg
gatcacggcgtcatgtacggcgccgtggagttctataaagcggcccgggaacaaggcatc
aagcccattatcggctgcgaggtttatgtggctccccgctcccgccacgaccgggagccc
caccgggatgattaccagtaccacctggtcctcctggccaccgacgccacgggttaccgc
aacctcacggccctggtctcggctgccttcctggaaggtttctattacaagccccgggtg
gaccgggagcttttgagccgccacagccagggtctcatagccctgagcgcctgcctggct
ggggaagtgccagcccaccttttaaagaaccgggaagatgcggcctatgaggcggctacc
tggctgcgggaggtctttggcccggagaatttttacctggaactccaggaccagggcctg
ccggaacagcggcagctcaaccgccggctggtagacctggcagccagattaaaaattccc
ctggtcgccaccaatgacgtccactacattcgccaggaccaggcccgggcccatgacgtc
ctcctctgtatccagacaggcaagaccctggacgatcctaaccgcctgcgttttcccacg
gcccagttttatttaaaatctcctgccgagatggacaacctcttccgggaggtaccctca
gccctggccaacaccctggccatcgccgagcgctgccatttcgacttcaccttcggccgg
ttacacctgccggcctaccaggtgccggcaggagaggacgcagccagttatctccgccgc
ctgagttacgagggccttaaacggcgttacccccatgacgatggaacggcccggcagcgc
ctggagtacgagctgggtataatcgagcaaatgggctatccgggctatttcttgatagtt
tgggatatggtcaatttcgcccgccggcgggggatcccggtggggccgggtcggggttcg
gccgccggcagcctggtggcctactgcctggggataacctccattgatcccctgcgctac
aacctcctctttgaacgttttttaaaccccgaacgggtcagtatgccggacatcgacatg
gacttctgcttcgaacggcgggatgaagtcatccagtatgtcctggagaagtacggccgt
gaccatgtggcccagatcattaccttcggtaccatggccgcccgggcggccgtccgggat
gtgggccgtgtcctgggtttgcccctgggtgaggtggacaggatcgccaagatggtgccc
atggagctgggtattaccctggagagggccctggccaccagcccggatttaaaagagagc
tacgaaggcaaccgggaggtgcgggaactcctggatacggcccgggccatcgagggtatg
ccccgccatgcctccatccatgccgcggggattgtcatcacccgggagcctttaattcat
tatctgcccctgcaaaagacaggggatgccgttaccacccagtaccccatgcaggctgtg
gaggaattggggctattgaagatggacctgctgggcctccgcaccctgacggttatcggc
cacgcccgggaggccatccggcgcaaccatggccgggaactggacctggaaagcctgccc
ctggatgaccggccaacctaccagcttctggccagcggtgaaaccagcggcatcttccag
ctagaaagtagcggcatgcgggccatcctgaaagaactcaagccggagcgctttgaagat
atcatcgccctggtggccctctaccggcccgggccactgggaagcggtatggtcgaagat
tttattaagcgcaaacacggggttacccccatcagttacctgcacccggccctggaaccg
atactcaaagacacctacggggttatcctctaccaggagcaggtcatgcgcattgccagc
gagttggccggttttaccctgggccaggccgacctcctgcgccgggccatggggaaaaag
aagcccgaggtcctggcggcccagcgggatcgcttcctggccggggcagaggccaaggct
ataccccgggatgtcgcgcagaaaatttttgagctgatggaatacttcgccggctacggc
ttcaatgccagccattcggcggcctacgccctggtagcctatcagacggcctacctgaag
gcccattacccggccgagcttatgggcgcccttctttccagcgtggccgagcacctggac
aagatggagccctacctggctgagtgccagcgcctggggatcgccgtcctgccgccggat
gtcaatgaatcaggggtcgatttcaccgtcactgggaggcagatccgctttggcctggcg
gccgttaaaaacgctggccgggccgccgccctggccattattgccgcccgggaagcaggc
ggtccctttacctccctcctggacttctgccggcgggtggacagccgccaggccaataaa
agggtggtggagagcctcatccgctgcggcgcctttaattctatcaaccccaaccgccgc
cagctcctggccggcctggacgagtgcctggaagtggccgccaggcgtcaggaagaccgc
cgcagcggccaggtttccctcatggacctggtgcctgaagaggttaacgatccccccctg
ccccaggtaaccgacttctcccgggccgatatactggccatggaaaaggaactcctgggc
ttttacctgagcggccatcccctggaaccctatgctccggtattaaaaaagctgacctcc
cattccctggccgatctggcggagatagccgatggcagccaggttaccatcggcggcctg
gtcagcggcctgcgccggctggtaacccgtaagggtgatcccatggccgttctcaccctg
gaggatttcagcggtcaggtagaagctgtcctctttccccggatgtacagccaggtacgt
tcctggctcgctcccgaccgggccgtcctggtccaggggcaggtcgataaacaggaagaa
ggggtccaggtcctggccaacctggtccggcccctggcgccggaggccggcgggggagac
cggaccctccctcctccggcagggacccacgggacattaccggaggcccggcagggtggg
ggacgtctctacctcaagctatctagtgagggacagctaacagccctgagggatacttta
gccgcccacccgggtccctgtcaggtatatctctatctggccgacagccgtaggactatc
gccttacacaggcgttattggatagaaccggtgccggagttgatggcaagtttggccggg
cttttaggcgggtatgataaaattaagctggtgcaggaaaatagaatttaa
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