Massilia oculi: DIR46_00945
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Entry
DIR46_00945 CDS
T05448
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
mtim
Massilia oculi
Pathway
mtim03030
DNA replication
mtim03430
Mismatch repair
mtim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DIR46_00945 (holB)
03430 Mismatch repair
DIR46_00945 (holB)
03440 Homologous recombination
DIR46_00945 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtim03032
]
DIR46_00945 (holB)
03400 DNA repair and recombination proteins [BR:
mtim03400
]
DIR46_00945 (holB)
Enzymes [BR:
mtim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DIR46_00945 (holB)
DNA replication proteins [BR:
mtim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DIR46_00945 (holB)
DNA repair and recombination proteins [BR:
mtim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DIR46_00945 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_16
YAcAr
AAA_29
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AWL03163
UniProt:
A0A2S2DCQ7
LinkDB
All DBs
Position
complement(216391..217413)
Genome browser
AA seq
340 aa
AA seq
DB search
MTMYPWQGAAWSQLQQMRARMPHAILFHGPAGTGKAGFIETFAQALLCENPQPDGHACGA
CASCGWFVQHNHPDYRRVRPEALEDDLPAEGEEGEAGGKSKSAKAPSKEIKIEQIRNLSD
FMNISTHRQGLRVVVLYPAEALNMPASNALLKTLEEPPPGTVFLLSSNSLDRLLPTILSR
CRKFALPTPSHDEALAWLKEQGVPDADSWLREQGGAPLAALAESTNGSRDDMEALLQFLA
RPAPDSELRAAEKLAKAELPALVSWTQRWLYDVFSYKLSGNIRYYPRYRKELAALAGRVQ
TPGLLRVIKAVNERRAVADHPLSAKLFVEDMLLEYTACCT
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatgtacccgtggcaaggggctgcctggtcccagctgcagcagatgcgcgcgcgc
atgccgcacgcgatcctgttccatggcccggccggcaccggcaaggccggtttcatcgag
accttcgcccaggccctgctgtgcgagaacccgcagcccgacggccacgcctgcggcgcc
tgcgcgtcctgcggctggttcgtgcagcacaaccatccggattaccgccgcgtgcggccc
gaggcgctcgaagacgacttgccggccgagggcgaggagggcgaggcgggcggcaagtcg
aagtcggccaaggcgccatcgaaagagatcaagatcgagcagatccgcaacttgtcggac
ttcatgaacatctcgacccaccgccagggcttgcgggtagtggtgctgtatccggccgag
gcgttgaacatgccggcctcgaatgcgctgctcaagaccctggaggaaccgccgccggga
accgtgttcctgctgtcgtccaacagcctcgaccgtctgttgccgacgatcctgtcgcgc
tgccgcaagttcgcgctgccgacgccgtcgcacgacgaggccctggcctggctcaaggag
cagggcgtgccggacgccgacagctggctgcgcgagcagggaggcgccccgctggcggcc
ctggccgagtcgaccaacggcagccgcgacgatatggaggcgctgctgcaattcctggcg
cggccggcgccggattctgagctgcgcgccgccgagaagctggccaaggccgagctgccg
gccctggtgtcgtggacccagcgctggctgtacgatgtgttttcgtacaagttgtctggc
aatatccgctactacccgcgctaccggaaggagctggcggcgctggccggccgcgtccag
acgccgggccttctacgggtcatcaaggcggtgaacgagcgccgtgctgtggcggatcat
cctttgtcggcaaaattgtttgtcgaagatatgctgcttgagtacactgcgtgctgcaca
tga
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