Massilia oculi: DIR46_01130
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Entry
DIR46_01130 CDS
T05448
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mtim
Massilia oculi
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtim03032
]
DIR46_01130
03036 Chromosome and associated proteins [BR:
mtim03036
]
DIR46_01130
03400 DNA repair and recombination proteins [BR:
mtim03400
]
DIR46_01130
DNA replication proteins [BR:
mtim03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DIR46_01130
Chromosome and associated proteins [BR:
mtim03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DIR46_01130
DNA repair and recombination proteins [BR:
mtim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DIR46_01130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
MarR
HU-CCDC81_bac_1
VWA_3
Motif
Other DBs
NCBI-ProteinID:
AWL03193
UniProt:
A0A2S2DCT5
LinkDB
All DBs
Position
complement(256711..256983)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIEEIAKSADITKASATRALDAMIEAVTESLKKNDSVTLVGFGTFTVGERAARTG
RDPRTKEPIKIKAAKVPKFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagacagaactgatcgaagaaatcgcgaagtccgcggacattacgaaggcctcg
gcgacgcgtgcactcgacgccatgatcgaagcggtcaccgaaagcctgaagaagaacgac
agcgtcaccctggtcggcttcggcaccttcaccgtgggcgagcgcgcagcgcgtaccggc
cgcgatccacgcaccaaggaacccatcaagatcaaggctgcgaaggttccgaaatttaag
gctggtaaagcgctgaaagatgctgtaaactaa
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