Massilia oculi: DIR46_02760
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Entry
DIR46_02760 CDS
T05448
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
mtim
Massilia oculi
Pathway
mtim03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DIR46_02760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtim03400
]
DIR46_02760
DNA repair and recombination proteins [BR:
mtim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
DIR46_02760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AWL03482
UniProt:
A0A2S2DDQ9
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All DBs
Position
605191..606264
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AA seq
357 aa
AA seq
DB search
MRSMWKGAISFGLVHIPVDMYTAVDSKGLDLTMLDRRDFSPVGFKRYNKGNGKEVAWDDI
VKGYEYEDGEYVVLSDEDLRRANPEATQTIDIQAFVNAEDVPLIYYDQPYYLAPGKGGTK
VYALLRETLREAGKIGIARVVIRVKQHLAALVCVGDTIVLNTLRYPDEMRDADELKIPSP
SSKTAAVTVKELKMAMALVEGMSEDWAPEQYHDTYREDVLALVKKKIKARQTKTITQPEP
EKEKRASGKVIDLVALLQASLGKKPAKAALAALDDDDDDDPPPRKSRKPAEDEDDDDDAP
APRARKTSGTGSRSGATAKSTRTAASKAAAKPAAKKAAAKKAAAKASAKAAARRKAA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcatgtggaaaggggcgatcagtttcgggctggtccacattccggtcgatatg
tacaccgcggtcgacagcaaggggctggacctgaccatgctcgaccggcgcgacttttcg
ccagtgggcttcaagcgctacaacaagggcaacggcaaggaagtcgcgtgggacgacatc
gtcaagggctacgaatatgaggacggcgagtatgtcgtgctgtccgatgaagacctgcgc
cgcgccaaccccgaggcgacccagaccatcgacatccaggccttcgtgaatgccgaggac
gtgccgctgatctactacgaccagccctattacctcgcaccgggcaagggcggcaccaag
gtgtatgccctgctgcgcgagaccctgcgcgaggccggcaagatcggcatcgcgcgcgtc
gtcatccgcgtcaagcagcacctggccgcgctggtgtgcgtgggcgacaccatcgtgctc
aacactttgcgctacccggacgagatgcgcgatgcggacgaactcaagatcccctcgccc
agttcgaagaccgccgccgtcaccgtcaaggaactcaagatggcgatggcgctggtcgag
ggcatgagcgaggactgggcgccggagcagtaccacgacacctaccgagaggacgtgctg
gccctggtcaagaagaagatcaaggccaggcagaccaagaccatcacccagcccgagccc
gagaaggaaaagcgcgccagcggcaaggtcatcgacctggtcgccctgctccaggccagc
ctgggcaagaagccggccaaggccgcgctggcggcgctggacgacgacgacgacgacgat
ccgccgccgcgcaagtcgaggaagccggccgaggacgaggacgacgacgacgacgccccg
gcgccgcgcgcgcgcaagacgtccggcacgggcagccgctccggcgccaccgccaagtcg
acccgcaccgcggcgagcaaggctgcggccaagccggccgcgaagaaggccgccgcaaaa
aaggcggcggcaaaagcctcggcgaaggcggcggcacgcaggaaggcggcgtga
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