Massilia oculi: DIR46_03790
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Entry
DIR46_03790 CDS
T05448
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mtim
Massilia oculi
Pathway
mtim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DIR46_03790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtim03400
]
DIR46_03790
Enzymes [BR:
mtim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DIR46_03790
DNA repair and recombination proteins [BR:
mtim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DIR46_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWL03645
UniProt:
A0A2S2DE61
LinkDB
All DBs
Position
complement(820707..821636)
Genome browser
AA seq
309 aa
AA seq
DB search
MKNTSQRDALFLAEMGIGPLWQLRDAPQSGAAVLTDAVTDAVIDAMSDPAAEAAVAEAAP
EAAAPAAAPVSAPAAAPEPAPAARVHTPLSAPPYRNPPPVEDASAWDDSVAPEPATPDVA
TMDWAGLRQAIAACKDCACGAGRKPVHGAGPRQARWLIVAGTPSALDDEAGQPLTGDPGK
LLDNMLHAVGLSRERDAYVTPLVKCRPLNAKGGDRAPTPGEIAACRPFVERELALTGATT
VLTLGQVATNGLLGRALQEPLAGARGEVHRLGETPLVPTLHPGELLLRGENKALAWADLC
RARSLGPRD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacacgagccagcgcgacgcgctgttcctggccgagatgggcatcggcccgctg
tggcagctgcgagatgcgccgcagtccggggccgcggtgttgaccgatgcggtgaccgat
gcggtgatcgatgcgatgagcgatccggcggccgaagcggccgtcgccgaggcggcgccg
gaagccgccgcgcccgcagcggcgccggtttctgcgcctgcggctgcaccggagccggcg
cctgccgcacgcgtccacacgccgctgtcggcgccgccttaccgcaatccgccgcccgtg
gaagacgcatcggcctgggacgacagcgtcgcgcccgaaccggcgacgcccgatgtcgcg
accatggactgggccgggctgcgccaggcgattgccgcatgcaaggattgcgcctgcggc
gcaggccgcaagcccgtccacggcgccggcccgcgccaggcgcgctggctgatcgtcgcc
ggcacgccgagcgcgctcgacgacgaggccggccagccgctcacgggcgaccccggcaag
ctgctcgacaatatgctgcacgcggtcgggctgtcgcgcgagcgcgatgcctacgtcacg
ccgctggtcaagtgccggccgctgaacgcgaagggcggcgaccgcgcgccgacccccggc
gagatcgccgcctgccgtcccttcgtggaacgcgaactggcgctcaccggagccacgacc
gtgctgaccctgggccaggtcgcgaccaacggcctgctgggccgcgcgctgcaggagccg
ctggccggcgcccgcggcgaggtacatcgcctgggcgagacgccgctggtgccgaccctg
catccgggcgaactgctgctgcgcggcgaaaacaaggcgctggcctgggccgacctgtgc
cgggcgcgttcccttggaccacgcgactag
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