Massilia oculi: DIR46_04315
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Entry
DIR46_04315 CDS
T05448
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
mtim
Massilia oculi
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtim03000
]
DIR46_04315
Transcription factors [BR:
mtim03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DIR46_04315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
HTH_29
HTH_23
HTH_IclR
HTH_8
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AWL03737
UniProt:
A0A2S2DEG9
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All DBs
Position
complement(924344..925258)
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AA seq
304 aa
AA seq
DB search
MRSQISDDITFRKLEILLAYMEGGNLNAAARMLDISAVSVHRALHSLEEGMSCQLFSLQG
RNLIPNDAAQVLAEVSREVVKLMADGIAATRSAAGYSADHLRIGSLYSLTTGAIPEVIIG
IKLRKQEIETELVLGSNAELLHKLKQNAIDAALMGMPDPDPEIESIPLFEDDVFFAAPAG
SPYSKMKEVDLRACAAEKFVCLKDGFVTLAGFQEAFRIAGYAPAIVTRVGDIFSLMNLVA
AGIGYTLLPGRVRNAFGDKVQLIPLKADYHMQQTIGLSFLRVRERDPNLLALAAVCRMLK
HRTA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccagatcagcgacgacatcaccttccgcaaactcgagatcctgctggcctat
atggaaggcggcaacctgaacgccgccgcgcgcatgctcgacatcagcgcggtgagcgtg
caccgcgcgctgcattcgctcgaggagggcatgagctgccagctgttcagcctgcagggc
cgcaacctgatcccgaacgacgcggcccaggtgctggccgaggtcagtcgcgaagtggtc
aagctgatggcggacgggatcgccgccacgcgctcggcggccggctattcggccgaccat
ctcaggatcggctccttgtattcgctgaccaccggggcgattcccgaggtcatcatcggc
atcaagctgcgcaagcaggaaatcgagaccgagctggtgctgggttcgaacgccgagctg
ctgcataaactcaagcagaacgcgatcgacgcggcgctgatggggatgcccgatcccgac
cccgagatcgaatcgatcccgctgttcgaggacgacgtgttcttcgccgcgccggccggt
tcgccctactcgaagatgaaggaagtcgacctgcgcgcctgcgcggccgagaagttcgtc
tgcctgaaggatggcttcgtgaccctcgcgggcttccaggaagccttccgcatcgccggc
tatgcgccggccatcgtcacccgcgtgggcgacatcttctcgttgatgaacctggtggcg
gccggcatcggctacaccttgctgccgggccgggtgcgcaatgccttcggcgacaaggtg
cagctgattcccctgaaagccgactaccacatgcagcagaccatcggcctgagcttttta
cgggtacgggaacgcgaccccaatctgctggcgctggcggccgtgtgccgcatgctcaag
cacaggaccgcctga
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