KEGG   Massilia oculi: DIR46_05180
Entry
DIR46_05180       CDS       T05448                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
mtim  Massilia oculi
Pathway
mtim03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mtim00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    DIR46_05180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtim03019]
    DIR46_05180
   03009 Ribosome biogenesis [BR:mtim03009]
    DIR46_05180
Messenger RNA biogenesis [BR:mtim03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DIR46_05180
Ribosome biogenesis [BR:mtim03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    DIR46_05180
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AWL03889
UniProt: A0A2S2DFM2
LinkDB
Position
complement(1115575..1116159)
AA seq 194 aa
MSQATPTTESAAAQRPNEFNLVWVDMEMTGLDPDNDRIIEVAVVVTDPELNIIAEGPVFA
IHQSDATLDKMDNWNKGTHGKSGLIDRVKASTVSEAQAEQELIAFLKQYVPANKSPMCGN
SICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCRRWKPEIAGGFKKHQKHTALADITES
IEELRYYREHFIQK
NT seq 585 nt   +upstreamnt  +downstreamnt
atgtcacaagctacaccaaccaccgagtccgccgcagcccagcgcccgaacgagttcaac
ctggtctgggtggacatggaaatgaccggcctggatccggacaacgaccgcatcatcgaa
gtggcggtggtcgttaccgaccccgagctgaacatcatcgccgaaggcccggtgttcgcc
atccaccagtcggacgcgacgctggacaagatggacaactggaacaagggcacccacggc
aagtcgggcctgatcgaccgcgtgaaagcctcgactgtcagcgaagcccaggccgagcag
gaactgatcgccttcctcaagcagtacgtgccggcgaacaaatctccaatgtgcggcaac
tcgatctgccaggaccgccgcttcatggcgcgcggcatgccgaagctggaagccttcttc
cactatcgtaacctggacgtgtcgacgctgaaggaattgtgccgccgctggaagcccgaa
attgccggtggtttcaagaagcaccagaagcacacggccctggccgacatcacggaatcg
atcgaagaactgcgctattaccgcgagcacttcatccagaagtaa

DBGET integrated database retrieval system