Massilia oculi: DIR46_05180
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Entry
DIR46_05180 CDS
T05448
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mtim
Massilia oculi
Pathway
mtim03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DIR46_05180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtim03019
]
DIR46_05180
03009 Ribosome biogenesis [BR:
mtim03009
]
DIR46_05180
Messenger RNA biogenesis [BR:
mtim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DIR46_05180
Ribosome biogenesis [BR:
mtim03009
]
Eukaryotic type
Pre-60S particles
RNases
DIR46_05180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AWL03889
UniProt:
A0A2S2DFM2
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All DBs
Position
complement(1115575..1116159)
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AA seq
194 aa
AA seq
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MSQATPTTESAAAQRPNEFNLVWVDMEMTGLDPDNDRIIEVAVVVTDPELNIIAEGPVFA
IHQSDATLDKMDNWNKGTHGKSGLIDRVKASTVSEAQAEQELIAFLKQYVPANKSPMCGN
SICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCRRWKPEIAGGFKKHQKHTALADITES
IEELRYYREHFIQK
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagctacaccaaccaccgagtccgccgcagcccagcgcccgaacgagttcaac
ctggtctgggtggacatggaaatgaccggcctggatccggacaacgaccgcatcatcgaa
gtggcggtggtcgttaccgaccccgagctgaacatcatcgccgaaggcccggtgttcgcc
atccaccagtcggacgcgacgctggacaagatggacaactggaacaagggcacccacggc
aagtcgggcctgatcgaccgcgtgaaagcctcgactgtcagcgaagcccaggccgagcag
gaactgatcgccttcctcaagcagtacgtgccggcgaacaaatctccaatgtgcggcaac
tcgatctgccaggaccgccgcttcatggcgcgcggcatgccgaagctggaagccttcttc
cactatcgtaacctggacgtgtcgacgctgaaggaattgtgccgccgctggaagcccgaa
attgccggtggtttcaagaagcaccagaagcacacggccctggccgacatcacggaatcg
atcgaagaactgcgctattaccgcgagcacttcatccagaagtaa
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