Massilia oculi: DIR46_05440
Help
Entry
DIR46_05440 CDS
T05448
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
mtim
Massilia oculi
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtim03000
]
DIR46_05440
Transcription factors [BR:
mtim03000
]
Prokaryotic type
Helix-turn-helix
Other families
DIR46_05440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
HTH_11
AAA
Mg_chelatase
AAA_2
HTH_psq
AAA_16
HTH_24
HTH_50
DIP2311-like_C
AAA_19
DUF6262
Motif
Other DBs
NCBI-ProteinID:
AWL03936
UniProt:
A0A2S2DGD4
LinkDB
All DBs
Position
1170604..1172202
Genome browser
AA seq
532 aa
AA seq
DB search
MNSSRSPLDAGDKPVIWTVSVSRLSDLFRDITVEYDHLALIEPLHLGFDEAAKHIRERLA
TEHCDVVIAAGSNAAWLKGRVSVPVVAAKASGFDVLKALARARRVSHRIGVISYQAPLPE
LGDFAATFGLDLAQRTYVTREDARAAVHELKAEGIAVIVGAGLITDLAEEAGLTGVFLYS
AASIRQAFDDALELARLTRLEAGRGRRKPTEQRARRGMNDLRGDSPAMERLRQTVVLYAR
SPSTVLIEGETGSGKELVAQAIHRESPRRGANRPFVAVNCGAIAESLLESELFGHEEGAF
TGARRGGHAGLFEAANGGTLFLDEIGEMPLALQTRLLRVLEEREVMRVGGTRPVPIDVRV
ISATHCDLEARVREGRFRADLFYRLAVLRLALPPLRARAQDIAPLAEWSLKQALAALDAR
PHPNLAAEITACAPLLASYAWPGNVRELRNLMERVALFLAAEPLQALTPAFMLSVAPELG
REVAAPGTAPSPAPGRESVAAVLARFGGQRDLAAQHLGISRTTLWRRLKTET
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtcccgttccccgctcgatgccggcgacaagcccgtcatctggaccgtctcc
gtctcgcgcctgtccgacctgttccgcgacatcaccgtcgaatacgaccacctagctttg
atcgaaccgctgcatcttggttttgacgaggctgcgaaacatatccgcgagcgcctggct
actgaacactgtgacgtggtcatcgcggccggctcgaatgccgcctggctcaagggccgc
gtgtcggtgccggtggtggcggccaaggccagcggcttcgacgtactgaaggcgctggcg
cgggcgcgccgcgtctcgcaccgcatcggcgtcatcagctaccaggcgccactgccggaa
ctgggcgacttcgccgccaccttcggcctcgacctggcccagcgcacttatgtcacgcgc
gaggatgcgcgcgccgcggtgcacgaactcaaggccgagggcatcgccgtgatcgtcggc
gccggattgatcaccgacctggccgaggaagccgggctgaccggcgtgttcctgtattcg
gcggcctcgatccgccaggccttcgacgatgcgctggaactggcgcgcctgacccggctc
gaggccggccgtggacggcgcaagcccactgaacaacgcgcgcggcgcggcatgaacgac
ttgcgcggcgactcgcccgcgatggagcgcctgcgccagaccgtggtgctgtacgcgcgc
tcgcccagcaccgtgctgatcgagggcgagaccggcagcggcaaggaactggtggcccag
gcgatccaccgcgaaagtccgcgccgcggcgccaaccgccccttcgtggcggtgaactgc
ggcgcgatcgccgagtcgctgctggagtcggaactgttcggccacgaggaaggcgcgttt
accggcgcgcgccgcggcggccacgccggcctgttcgaggccgccaacggcggcaccctg
ttcttggacgagatcggtgaaatgccgctggcgctgcagacccgcctgctgcgcgtgctg
gaagaacgcgaggtgatgcgggtcggcggcacccggccggtgccgatcgacgtgcgcgtg
atcagcgccacccactgcgatctggaagcgcgggtgcgcgaaggacgttttcgggccgac
ctgttctatcggctggcggtactgcgcctggccttgccgccgctgcgtgcccgggcgcag
gacatcgcgccgctggccgaatggtcgttgaaacaggcgttggccgcgctcgatgcgcgt
ccgcatccgaacctggcggccgagatcaccgcttgcgcgcccctgctcgcttcctatgcc
tggccgggcaatgtgcgcgagctgcgcaacctgatggaacgggtcgccctgttcctggcg
gccgagccgctgcaggccttgacgccggccttcatgctgtcggtggcgccggaactgggg
cgagaagtggcggcccctggcacggcgccctcccctgcgcctgggcgcgaatcggtggct
gccgtgctggcgcgcttcggcggacaacgcgatcttgccgcgcagcacctcgggatcagc
cgcacgaccctgtggcgccgcctcaagaccgagacttag
DBGET
integrated database retrieval system
