Massilia oculi: DIR46_06935
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Entry
DIR46_06935 CDS
T05448
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mtim
Massilia oculi
Pathway
mtim00541
Biosynthesis of various nucleotide sugars
mtim01100
Metabolic pathways
mtim01250
Biosynthesis of nucleotide sugars
Module
mtim_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DIR46_06935 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mtim01005
]
DIR46_06935 (rfaD)
Enzymes [BR:
mtim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DIR46_06935 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
mtim01005
]
Core region
DIR46_06935 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
DapB_N
Motif
Other DBs
NCBI-ProteinID:
AWL07654
UniProt:
A0A2S2DQK7
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All DBs
Position
complement(1503241..1504251)
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AA seq
336 aa
AA seq
DB search
MMILVTGAAGFIGANLVHALSQREPFSVFAVDNMSRPEKFHNIVDAEIADYADKEDFLVR
LKAGEFDNKFTAVLHQGACSNTMETDGRYMMKNNYDYTVALFEFCQRQGIPFIYASSAAV
YGAGTVFREERPLERPLNVYGYSKFLFDQYLRRYWQAKGQDAGSQVVGLRYFNVYGPLEG
HKGTMASVPFHQYHQFFKDGKVRLFGANEGYEAGAQMRDFIYVEDVVKVNLFFLDNPDKR
GIFNLGTGRAQPFNDLAVATVNALANEGKPALSLQQIIDGGLLEYLPFPDKLKGKYQSFT
QADISALRAAGYDAPFTDVATGVAKYMDWLRAQPAR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atcatgattctggttaccggcgcagcaggcttcatcggcgcgaacctcgtgcacgcgctg
tcgcagcgcgagccgttcagcgtcttcgccgtcgacaatatgtcgcgtcccgagaagttc
cacaacatcgtcgacgccgagatcgccgactatgccgataaagaagactttctggtgcgc
ctgaaggcgggcgaattcgacaacaagttcaccgccgtgctgcaccagggcgcctgctcc
aacacgatggagaccgacggccgctacatgatgaagaacaactacgactacacggtcgcc
ctgttcgaattctgccagcgccagggcattcccttcatctatgcctcgtcggccgccgtc
tacggcgccggcaccgtgttccgcgaagagcgcccgctggaacgtccgctcaacgtctat
ggctactcgaaattcctgttcgaccagtacctgcgccgctactggcaggccaagggccag
gacgccggcagccaggtggtcggcctgcgctatttcaacgtctacggtccgctcgaaggc
cacaagggcacgatggcatcggtgccgttccaccagtaccaccagttcttcaaggacggc
aaggtcaggctgttcggcgccaacgagggttatgaggccggcgcccagatgcgcgacttc
atctacgtcgaagacgtggtcaaggtcaacctgttcttcctcgataatccggacaagcgc
ggcatcttcaacctcggcaccggccgcgcccagccgttcaatgacctggcggtggccacc
gtcaacgccctcgccaatgaaggcaagccggcgctgtcgctgcagcagatcatcgacggc
ggcctgctcgagtacctgccgttcccggataaattgaagggcaagtaccagagcttcacc
caggccgacatctcggcgctgcgcgcggccggctacgacgcaccgttcaccgacgtggcg
accggggtcgcgaagtacatggactggctgcgcgcccagccggcgcgctga
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