Massilia oculi: DIR46_08050
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Entry
DIR46_08050 CDS
T05448
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mtim
Massilia oculi
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtim03016
]
DIR46_08050
Enzymes [BR:
mtim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DIR46_08050
Transfer RNA biogenesis [BR:
mtim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DIR46_08050
Prokaryotic type
DIR46_08050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TcfC
Motif
Other DBs
NCBI-ProteinID:
AWL04395
UniProt:
A0A2S2DGB1
LinkDB
All DBs
Position
complement(1709996..1710922)
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AA seq
308 aa
AA seq
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MNGRPAKKPRDLVDGVLLLDKPVGLSSNDALIKAKRVLNAKKAGHTGTLDPFATGLLPLC
FGEATKFSQDLLEADKTYEATVHLGIMTNTGDTEGEAIETLPVDVTLEQIEAALARFRGP
IQQVPPMYSALKRDGKALYEYAREGITLEREARPVTIHALSMIDYQAPFLKIRVTCSKGT
YVRVLGEDIGAALGCGAHLNALRRIEVGALDVTGMITLDAMLAHPDPRSLLRPVDALLST
FPSIELDAELARRFLQGQRLALGKEDVAVPERPGRVRIYHDGRLLGTGQLGEYAILAPER
LISTAPAA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggacgtcccgcgaaaaaaccgcgcgatctggtcgatggcgtgctgttgctcgac
aagccggtcggcctgtcgtcgaacgacgccctcatcaaggccaagcgtgtcctgaacgcg
aagaaagccggccacaccggcacgctcgacccgttcgccaccggcctgctgccgctgtgc
ttcggcgaagcgaccaaattctcgcaagacctgctcgaggccgacaagacctatgaggcc
acggttcacctgggcatcatgacgaatacgggcgacaccgagggcgaggccatcgagacc
ctgccggtcgacgtcaccctggagcagatcgaggcggcgctggcgcgtttccgcggtccg
atccagcaggtgccgccgatgtattcggcgctcaagcgcgacggcaaggccctgtatgaa
tatgcgcgcgagggcatcacgctcgagcgcgaggcgcggccggtcaccatccacgcgctg
tcgatgatcgactaccaggcgccattcctgaagatccgcgtcacctgcagcaagggcact
tatgtgcgtgtgctgggcgaggacatcggcgccgcgctcggctgtggggcgcacctgaac
gcgctgcgccggatcgaggtcggcgcgctggacgtcacgggcatgatcacgctggacgcg
atgctggcgcacccggatccgcgctcgctgctgcggccggtcgatgcgctgttgtcgacc
ttcccgtcgatcgaactggacgccgaactggcaaggcgcttcctgcaaggccagcgcctg
gcgctcggcaaggaagacgtcgccgtaccggaacggccgggcagggtgcgcatctaccac
gacggccgcctgctcggcaccggccagctgggcgagtacgcgatcctggcgccggagcgc
ctgatctcgaccgcgccggccgcctga
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