Massilia oculi: DIR46_09300
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Entry
DIR46_09300 CDS
T05448
Name
(GenBank) transcriptional regulator CynR
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
mtim
Massilia oculi
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtim03000
]
DIR46_09300
Transcription factors [BR:
mtim03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DIR46_09300
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like
HVO_A0261_N
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AWL04616
UniProt:
A0A2S2DIC4
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Position
2013336..2014226
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AA seq
296 aa
AA seq
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MQLRLIRYLLAVAEHGNFTRAAESLHVSQPTLSQQIIQLEDMLGVALLDRGGRTVKVTDA
GRVYIQYAERALRELETGRRAIHDVQDLVRGELRLATTPTFTAYLVGPLLAAFHARYPGI
MVRLKEMSLDTIAAAVAADEVDLGIAFAVSRPADDIECEPLLFERLHVVVGTQHKFAART
RPITPEMLATERLGVLSLDFATRRHIDDYLRSLGIAPYIAMETNTISALIEVVRRSDMIT
ILPQAIGLQHADLRNIAITPEPQPRTATLLYRRDVYRSAASIAFTALAKQSFSSTS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacttcgcctgatccgttatctgttggccgtggctgaacacggcaatttcacgcgt
gccgctgagtctcttcacgtctcgcagcccacgctatcgcagcagatcatccagctcgag
gacatgcttggggttgcgttgctcgaccgtggtgggcgaacggtgaaggtcaccgatgcc
ggcagggtctatattcagtacgcggaacgcgctttgcgcgagctggaaacaggtcggcgt
gcaattcacgatgtgcaggacctggtgcgcggcgagctgcgtctggcaaccacgccaact
tttactgcctatctggtcggtccattactggcggcgtttcacgcccgttatccagggatc
atggtccgcttgaaagagatgtccctcgataccattgcagccgccgtggctgccgatgag
gtcgacctgggcattgcatttgcggtctcgcgtcccgctgacgacatcgaatgcgagccc
ttgctgtttgaacgtctgcatgtagtcgtcggtacgcagcacaagttcgctgcgcgtacg
cgaccgattaccccagagatgttagcgaccgaacgactgggagtgctcagccttgatttt
gcgacgcgtcgccacatcgacgattatcttcgctcgctcggcattgctccgtacattgcg
atggaaacgaatacgatcagcgccttgatcgaggtagtgcgccgcagcgacatgatcacg
atactacctcaagccatcggtctacagcatgctgatcttcgcaacatagccattacgccc
gaaccgcagccgcgcactgcaacgttactgtatcgtcgcgacgtatatcgctctgccgcg
tcgatcgccttcacggccttggccaagcagtcgttcagcagcacgagctga
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