Massilia oculi: DIR46_09555
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Entry
DIR46_09555 CDS
T05448
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mtim
Massilia oculi
Pathway
mtim03030
DNA replication
mtim03410
Base excision repair
mtim03420
Nucleotide excision repair
mtim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DIR46_09555
03410 Base excision repair
DIR46_09555
03420 Nucleotide excision repair
DIR46_09555
03440 Homologous recombination
DIR46_09555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtim03032
]
DIR46_09555
03400 DNA repair and recombination proteins [BR:
mtim03400
]
DIR46_09555
Enzymes [BR:
mtim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DIR46_09555
DNA replication proteins [BR:
mtim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DIR46_09555
DNA repair and recombination proteins [BR:
mtim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DIR46_09555
NER (nucleotide excision repair)
GGR (global genome repair) factors
DIR46_09555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
AWL04659
UniProt:
A0A2S2DHU9
LinkDB
All DBs
Position
complement(2061560..2064331)
Genome browser
AA seq
923 aa
AA seq
DB search
MDNTLLLVDGSSYLYRAYHALPDLRSPDGFPTGAMHGMVNMLRRLRADFPAAYIACVFDA
KGKTFRDDLYPEYKATRASMPEDLGKQIEPIHEVVRYMGWPILMVDGVEADDVIGTLAVQ
ATARGMKTVVSTGDKDLAQLVNDKVMLINTMTNERMDEAGVLAKFGVPPNRIIDYLTLVG
DTVDNVPGVAKCGPKTAVKWLTLHGSLDGVIENAASIGGAVGANLQAALEWLPKGRELIT
VKTDCDLVKHVISFEETLVGRPEDAEALRDFFQRYGFKTMLRDLGGAKATDGSVRPAAGS
APGGGPLNSPEGAATLAGMPVIKGEYETILTDEQLDKWLALVDAAELTSVDTETTSLDPM
TAEMVGISLSVEVGKGAYIPVAHRYAGAPDQLSREHVLEKMRGWLENPAKPKVGQNLKYD
MHIFANHGVTLKGIAHDTLLQSYVFESHKPHDMDTMAMRHLGYTTIPYVDVCGKGAKQIC
FDQVELARATEYAGEDSDITLRLHQSMLPEVQKDKGLAYIYREIEMPTMEVLHKIERNGV
LIDSALLDVQSGELGKRMMELEQQAYEAAGGPFNLGSPKQIGEIFFGKLGLPVIKKTATG
APSTDEEVLQKLAEDYPLPKILLEHRGMSKLKSTYTDKLPKMVNPNTGRVHTNYAQAVAI
TGRLSSNEPNLQNIPVRNAEGRRIREAFIAAPGHVIVSADYSQIELRIMAHISGDAAMLK
AFADGEDIHRATAAEIFGIPPADVQSEQRRYAKVINFGLIYGMSAFGLAGNLGIERAAAA
NYIERYFARFSGVKQYMDNTRLEAKARGYVETVFGRRLWLPEINSPNGPRRAGAERAAIN
APMQGTAADLIKMAMIAVQNWIESDGLGTRMIMQVHDELVLEVPEGELELVRVKLPELMA
GVAKLNVPLLAETGVGKNWEEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggacaataccctgctgctcgttgacggttccagttatctttatcgcgcctaccacgcg
ctgcccgacctgcgcagcccggacggcttcccgaccggcgccatgcacggcatggtcaat
atgttgcgccgcctgcgcgccgacttcccggccgcctacatcgcctgcgtgttcgacgcc
aagggcaagaccttccgcgacgacctgtatccggaatacaaggccacgcgcgcctcgatg
ccggaagacctgggcaagcagatcgaaccgatccacgaagtggtacgctacatgggctgg
ccgatcctgatggtcgatggggtcgaagccgatgacgtgatcggcaccctggcggtgcag
gcgacggcgcgcggcatgaagaccgtggtctcgaccggcgacaaggacctggctcaattg
gtcaacgacaaggtcatgctgatcaataccatgaccaacgagcgcatggacgaagcgggc
gtgctggccaagttcggcgtgccgccaaaccgcatcatcgactacctgaccctggtcggc
gacaccgtcgacaacgtgccgggcgtggccaagtgcggccccaagacggccgtcaaatgg
ctgaccctgcacggctcgctcgatggcgtgatcgagaacgcggccagcatcgggggcgcc
gtcggcgccaacctgcaggcggcgctggagtggctgccgaaggggcgcgaactgatcacc
gtcaagaccgactgcgacctggtcaagcacgtgatttcgttcgaggaaacgctggtcggc
cgtccggaagacgccgaggcgttgcgcgactttttccagcgttatggtttcaagaccatg
ctgcgcgacctgggcggcgccaaggcgaccgatggcagcgtgcgtccggccgccggcagc
gcgccgggcggcgggccgctcaattcgccggaaggcgcggcgaccctggccggcatgccg
gtcatcaagggcgagtacgaaaccatcctcaccgacgagcagctggataaatggctggcg
ctggtcgacgctgcggagctgacctcggtggacaccgaaaccacctcgctcgacccgatg
acggccgagatggtcggcatctcgttgtcggtcgaggtgggcaagggcgcctacatcccc
gtagcgcaccgctacgccggcgcgccggaccagctgtcgcgcgagcacgtgctggaaaag
atgcgcggctggctggaaaatccggccaagccgaaggtgggccagaacctcaagtacgat
atgcacatcttcgccaaccatggcgtgaccctgaaaggcatcgcgcacgacacgctgctg
caatcgtacgtgttcgagtcgcacaagccgcacgatatggacacgatggcgatgcgccac
ctgggctacaccacgattccctacgtggacgtgtgcggcaagggcgccaagcagatctgc
ttcgaccaggtcgagctggcgcgcgccaccgagtatgccggcgaggattcggacatcacc
ctgcgcctgcatcagagcatgctgccggaagtgcagaaggacaagggtctcgcctatatc
taccgcgagatcgagatgccgaccatggaagtgctgcacaagatcgagcgcaacggcgtg
ctgatcgacagcgcgctgctcgatgtgcagtcgggcgaactgggcaagcgcatgatggag
ctggaacagcaggcctatgaggcggcgggcggcccgttcaacctgggttcgccgaaacag
atcggcgagatcttcttcggcaagctcggcctgccggtgatcaagaagaccgccaccggc
gcgccgtcgaccgacgaagaggtgctgcagaagctggccgaggattatccgctgccgaag
atcctgctcgagcaccgcggcatgtccaagctcaagtcgacctataccgacaagctgccg
aagatggtcaacccgaacactggccgcgtgcacacgaattacgcgcaggcggtggcgatt
accggccgcctgtcgtcgaacgagccgaacctgcagaacatcccggtgcgtaatgccgaa
ggccgccgcatccgcgaagccttcatcgccgcccccggccacgtgatcgtctcggccgac
tattcgcagatcgagctgcgcatcatggcccacatctcgggcgacgcggcgatgctcaag
gctttcgccgacggcgaggacatccaccgcgccaccgccgccgagatcttcggcatcccg
ccggccgacgtgcaaagtgagcagcgccgctacgccaaggtgatcaacttcggcctgatc
tatggcatgagcgctttcggcctggccggcaacctgggcatcgaacgcgccgcggccgcc
aactatatcgagcgctatttcgcgcgcttctcgggcgtgaagcagtatatggacaacacg
cgcctggaagcgaaggcgcgcggctacgtcgagaccgtgttcggccgccgcctgtggctg
cccgagatcaattcgccgaacggcccgcgccgcgccggcgccgaacgcgcggcgatcaat
gcgccgatgcagggcacggcggccgacctgatcaaaatggcgatgatcgcggtgcaaaac
tggattgaaagcgatgggctgggcacgcgcatgatcatgcaggtgcatgatgaactggtg
ctcgaagtgccggaaggcgagctggaactggtgcgggtcaagctgccggagctgatggcg
ggcgtggccaagttgaatgtgccgctgttggccgagactggcgtgggcaagaactgggaa
gaagcgcactaa
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