Massilia oculi: DIR46_11515 Help Entry DIR46_11515       CDS       T05448                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism mtim  Massilia oculi Pathway mtim02020   Two-component system mtim02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:mtim00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     DIR46_11515  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     DIR46_11515  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mtim03021]     DIR46_11515 Transcription machinery [BR:mtim03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      DIR46_11515 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 Xre-like-HTH HTH_IclR HTH_Crp_2 Motif Other DBs NCBI-ProteinID:  AWL04992 UniProt:  A0A2S2DI15 LinkDB All DBs Position complement(2491482..2492957) Genome browser AA seq 491 aa AA seqDB search MKQSLQLRTSQHLALTPQLQQSIRLLQLSTLELHQEIEQILGDNPLLERLDDPLDRSVRL LADGAINNAPANGEAPPAPGQQAEGQDAPAQEGEGFENGADHDRFDADWSEGGAPSSGGG EDEDGRPQLEACAITLREHLMEQVREATLSARDRALAELVIDALDDNGYLEEPLDEIHAR LPEELGIEIDELRCALALVQSMDPVGVGARSAAECLALQIRRMPGVPLVTRRMALTIVEG YLSWFAQREYSKLKKALDCDDEDLREVQAVVRQCNPHPGAAFASNVSDYVVPDVIVRRSK SGWAVTLNPDVMPRLRVNSLYASLLKQGKSEAQMGAQMQEAKWLIKNMRQRFDTILRVAE AIVERQRNFFSHGAVAMRPLVLREIADTLGLHESTISRVTTQKYMLTPHGMFELKYFFGS HVATEAGGEASSTAIRALIAQLTGAEDPRNPLSDSKIAEMLGEQGMVIARRTVAKYREAL KIPPVSLRKSL NT seq 1476 nt NT seq  +upstreamnt  +downstreamnt atgaaacagtccctgcaacttcgcacttcgcagcacctcgcgcttacgccgcaactgcag cagtcgatccggttgctgcaactgtcgacgctcgagctgcaccaggagatcgagcagata ctgggcgataaccccttgctcgagcggctcgacgatccgctcgaccgttcggtacgcttg ctggccgatggcgcgatcaacaatgcgcccgccaacggcgaggcgccaccggcccccggc cagcaggccgaaggccaggacgcgccggcgcaggagggcgagggtttcgagaacggcgcg gaccacgatcgctttgatgccgactggagcgaaggcggcgcgccatcgtcgggcggcggc gaggacgaggacggccgcccgcaactggaagcctgcgctataaccctgcgcgaacatctg atggagcaggtgcgcgaagccaccttgtcggcgcgcgaccgtgcgctggccgagctggtg atcgatgcgctggacgacaacggctacctcgaggagccgctcgacgagatccacgccagg ctgcccgaagagctcgggatcgagatcgacgaattgcgctgcgcgctggcgctggtgcag agcatggacccggtgggcgtcggcgcgcgcagcgcggccgagtgcctggcgctgcagatc cggcgcatgcccggtgtgccgctggtgacgcggcgcatggcgctgaccatcgtcgagggt tacctgagctggttcgcccagcgcgaatacagcaagctgaagaaggcgctcgactgcgac gacgaagacttgcgcgaggtgcaggccgtggtgcgccaatgcaatccgcacccgggcgcg gcgtttgcctcgaacgtgtcggactacgtggtgccggacgtgatcgtgcgccgttccaag agcggctgggcggtcaccctgaacccggacgtgatgccgcgcctgcgcgtgaacagcctg tacgccagcctgctcaagcagggcaagagcgaggcgcagatgggcgcgcagatgcaggaa gcgaagtggctcatcaagaatatgcgccagcgattcgacaccatcctgcgtgtggcggag gcgatcgtcgagcgccagcgcaattttttctcgcatggcgcggttgccatgcggcccctt gttttacgtgagatagctgatacactaggcctacacgagagcacaatttctcgtgtcaca acgcagaaatacatgctgaccccgcacggcatgtttgagttgaagtatttcttcggcagc cacgttgccaccgaggcgggaggcgaagcatcctcgacggcaatccgtgcgctcatcgca caattgacaggagcagaagaccctaggaacccattgtccgacagcaagatcgcggagatg ctcggggaacaaggcatggtcatcgcgcgccggacggttgcaaaataccgtgaagccctc aagataccccctgtaagcctccgcaagtccttgtaa

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