Massilia oculi: DIR46_11700
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Entry
DIR46_11700 CDS
T05448
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mtim
Massilia oculi
Pathway
mtim00300
Lysine biosynthesis
mtim00470
D-Amino acid metabolism
mtim01100
Metabolic pathways
mtim01110
Biosynthesis of secondary metabolites
mtim01120
Microbial metabolism in diverse environments
mtim01230
Biosynthesis of amino acids
Module
mtim_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DIR46_11700 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DIR46_11700 (lysA)
Enzymes [BR:
mtim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DIR46_11700 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AWL05020
UniProt:
A0A2S2DI38
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All DBs
Position
2533662..2534939
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AA seq
425 aa
AA seq
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MSYFPYQDGVLHAENVSLSAIAEQFGTPTYVYSKAALLDNFSAYHDACQGRDALVCYAMK
ANSNLAVLDLLARQGAGFDIVSGGELLRVIAAGGDPGKTIFSGVGKTVEEMTLALEKGIL
CFNVESIPELHRLNEVAGTLGMRAPVSLRVNPNVDAKTHPYIATGLKANKFGVAFDDALD
TYRTAAGLPHLDVVGIDCHIGSQLLDDAPLLEALDKLIELIDTLHAEGIHLHHLDIGGGI
GVDYGVAGDKPPVPVGDYLGRLFARIDAWRAEKHGGQPVKVIFEPGRSIVANAGVLLTKT
EFLKPGAEKNFCIVDAAMNDLMRPTLYQAWMGVQPVSPRDGEKLVWDIVGPVCESGDWLA
RERELALAQGDLLAIMTAGAYGMTMASNYNTRGRAAEVIVDGDVTHLVRRRETPAEVFAL
ESMIK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacttcccgtaccaagacggcgtcctgcacgccgaaaacgtttcgctgtccgcc
atcgcggaacagttcggcacgccgacctacgtctactcgaaagccgccctgctcgacaac
ttctccgcttaccacgacgcctgccagggccgcgacgccctcgtctgctatgcgatgaag
gccaactcgaacctggccgtgctcgacctgctggcgcgccagggtgcgggcttcgacatc
gtctcgggcggagaactgctgcgcgtgatcgcggccggcggcgacccgggcaagaccatt
ttttcaggcgtcggcaagactgttgaagagatgaccctcgcgctggaaaaaggcatcctc
tgcttcaacgtcgaatcgatccccgaactgcaccgcctcaacgaggtcgccggcacgctc
ggcatgcgcgccccggtctcgctgcgcgtcaacccgaacgtcgacgccaagacccacccg
tatatcgcgaccggcctgaaggccaacaagttcggcgtggccttcgacgatgcgctggac
acctaccgcaccgccgcgggcctgccgcacctggacgtggtcggcatcgactgccatatc
ggctcgcagctgctggacgacgccccgctgctcgaagccctcgataagctgatcgaactg
atcgataccttgcatgccgaaggcatccacctgcaccacctggacatcggcggcggcatc
ggtgtcgactacggcgtggccggcgacaagccgccggtgccggtgggcgactatctgggc
cgcctgttcgcgcgcatcgacgcctggcgcgccgagaagcacggcggccagccggtcaag
gtgatcttcgagccgggccgctcgatcgtggccaacgccggcgtgctgctgacgaagacc
gaattcctcaaacccggtgccgagaagaacttctgcatcgtcgacgccgcgatgaacgac
ctgatgcgtccgaccctgtaccaggcctggatgggcgtgcagccggtgagcccgcgcgat
ggcgaaaaactggtgtgggacatcgtcggccccgtgtgcgagtcgggcgactggctggcg
cgcgagcgcgaactggctctggcccagggcgacctgctggccatcatgacggccggcgcc
tacggcatgacgatggcgtcgaactacaacacccgcggccgcgcggccgaggtgatcgtc
gatggcgacgtcacccacctggtgcggcggcgcgagacgccggccgaggtgttcgcactc
gagtcgatgatcaagtaa
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