Massilia oculi: DIR46_11780
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Entry
DIR46_11780 CDS
T05448
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mtim
Massilia oculi
Pathway
mtim03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DIR46_11780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtim03021
]
DIR46_11780
03400 DNA repair and recombination proteins [BR:
mtim03400
]
DIR46_11780
Enzymes [BR:
mtim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DIR46_11780
Transcription machinery [BR:
mtim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DIR46_11780
DNA repair and recombination proteins [BR:
mtim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DIR46_11780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF7219
Motif
Other DBs
NCBI-ProteinID:
AWL05036
UniProt:
A0A2S2DJJ8
LinkDB
All DBs
Position
complement(2553748..2554725)
Genome browser
AA seq
325 aa
AA seq
DB search
MQNSLLKPRIIDVEALGAGHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSSLDGVQEDVVDLLLNLKGVVFKVHNRDSVTLTLKKEGEGAVLASDIDLPHDVEL
INPDHVIAHLTAGGKLDMQIKVEKGRGYVPGNVRRLSEDTNKTIGRIILDASFSPVRRVS
YAVESARVEQRTDLDKLIINIETNGVITPEEAIRQSARVLVDQLNVFAALEGTEAAAEAP
SRAPLVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRSENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatagtttgttgaagccacgtatcatcgacgtcgaagcactgggcgccggccac
gcgaaagtcgtgatggagccgttcgagcgtggctatggccacaccctcggcaacgcactg
cgtcgcgtcctgctgtcgtcgatggtgggctatgcgccgaccgaagtgacgatcgctggt
gtcgtgcatgaatactcgtcgctggatggcgtgcaggaagacgtggtcgacctgctgctg
aacctgaaaggcgtggtcttcaaggtccacaaccgcgattccgtcaccctgaccctgaag
aaggaaggcgaaggcgccgtcctggcttcggacatcgacctgccgcacgacgtcgaactg
atcaacccggaccacgtcatcgcccacctgaccgcaggcggcaagctggacatgcagatc
aaggtcgaaaaaggccgcggctacgtgccgggcaacgtccgccgcctgtcggaagacacc
aacaagaccatcggccgcatcatcctggacgcgtcgttctcgccagtgcgccgcgtgtcg
tatgccgtggaatcggcccgtgtcgagcagcgtaccgacctggacaagctgatcatcaac
atcgagaccaacggcgtcatcaccccggaagaagcgatccgccagtcggcgcgcgtgctg
gtcgaccagctgaacgtgttcgccgccctggaaggcaccgaggccgccgccgaagcgcca
tcgcgcgcaccgctggtcgatccgatcctgctgcgtccggtcgacgacctggaactgacc
gtccgttcggccaactgcctgaaagcggaaaacatctactacatcggcgacctgatccag
cgttcggaaaacgaactgctcaagacgccgaacctgggccgcaagtcgctcaacgaaatc
aaggaagtccttgcttcgcgcggcctgaccctgggcatgaaactcgagaactggccacca
gccggcctggaaaagtaa
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