Massilia oculi: DIR46_14595
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Entry
DIR46_14595 CDS
T05448
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mtim
Massilia oculi
Pathway
mtim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DIR46_14595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtim03400
]
DIR46_14595
DNA repair and recombination proteins [BR:
mtim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DIR46_14595
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DIR46_14595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_23
AAA_21
DnaJ_CXXCXGXG
nSTAND3
BCA_ABC_TP_C
Viral_helicase1
AAA_25
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AWL05544
UniProt:
A0A2S2DJN3
LinkDB
All DBs
Position
complement(3186466..3189315)
Genome browser
AA seq
949 aa
AA seq
DB search
MEEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC
PQHPHEPLSAQTVSQMVDAVLAIPEGTKLMILAPVVAGRKGEHGDLFQAMQAQGFVRFRI
ASGVNAAKIYEIDELPKLKKTEKHSIDVVIDRVKVNPDIKQRLAESFETALRLADGRAVA
YEMDTEKETVFSNKFACNVCGYSLQELEPRLFSFNNPMGACQECDGLGHIEFFDPKRIVA
FPHLSLASGAVKGWDRRNQFYFQMLQSLAAHYDFDLDKPFEQLPKSSQEAVLFGSGKTAI
PFSYVNERGRTVIREHTFEGVVNNLQRRYRETDSMAVKEELAKFINEKKCPACEGARLRT
EARFVKIGQGEQQRAIYEVSDKPLRETLDYFDKLELSGAKRDIAERVIKEIVSRLKFLNN
VGLDYLSLDRSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIATLK
HLRDIGNSVLVVEHDEDAIRTADYIVDMGPGAGVHGGAVIAEGTLEQIMNNEHSLTAQYL
DGRRKIEVPKKRTKADPARQLVITGAKGNNLKDVTLTLPVGLMTCVTGVSGSGKSTLIND
TLYPALSRHLYGSQTEPAEHSSIHGLEHFDKVISVDQAPIGRTPRSNPATYTGLFTPIRD
LFATVPTAKERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKRYNR
ETLEVQYKGKNITEVLDMTVEDAHEFFKPVPVIARKLQTLLDVGLGYIKLGQSATTLSGG
EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFADIDLLLKVIHRLRDQGNTLAIIEHNLD
VIKTADWIVDLGPEGGAGGGMIVASGTPEQVAKVKDSPTGKYLKPLLKG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaattcgcattcgtggtgcccgcacgcacaatctgaagaacatcaacctcgac
ctgccgcgcaacaagctgatcgtgatcaccggcctgtcgggctcgggcaaatcctcgctc
gccttcgacacgctgtatgcagaaggccagcgccgctacgtcgaatcgctgtcggcctat
gcgcgccagttcctgcaactgatggaaaagccggacgtcgacctgatcgaaggcctgtcg
ccggcgatctcgatcgagcagaaagcgacctcgcacaacccgcgctcgaccgtcggcacc
gtcaccgagatccacgactacctgcgcctgctgtacgcgcgcgtcggcacgccgtattgc
ccgcagcacccgcatgagccgctgtcggcccagaccgtgtcgcagatggtcgatgcggtg
ctcgccatcccggaaggtaccaagctgatgatcctggcgccggtcgtggccggccgcaag
ggcgaacatggcgacctgttccaggccatgcaggcccagggcttcgtgcgcttccgcatc
gccagcggcgtcaatgccgccaagatctatgaaatcgatgaactgcccaagctcaagaag
accgagaagcacagcatcgacgtcgtgatcgaccgggtgaaggtgaatccggacatcaag
cagcgcctggccgaaagcttcgagaccgccctgcgcctggccgacggccgcgccgtggcc
tacgagatggacaccgagaaggaaaccgtcttttcgaacaagttcgcctgtaatgtttgc
ggctactcgctgcaagagctggaaccacgcctgttctcgttcaataacccgatgggcgcc
tgccaggaatgcgatggcctgggccatatcgagttcttcgatccgaagcggatcgtggcc
ttcccgcacctgtcgctggcctccggcgccgtcaagggctgggatcgccgcaaccagttc
tacttccagatgctgcagagcctggcagcccattacgacttcgacctcgacaagccgttc
gagcaattgccgaaatcgtcgcaggaagccgtgctgttcggctccggcaagaccgcgatc
ccgttcagctacgtgaacgaacgcggccgcaccgtgatccgcgagcataccttcgaaggc
gtggtcaacaacctgcagcggcgctaccgcgagaccgattcgatggcggtcaaggaagag
ctggccaagttcatcaacgaaaagaaatgcccggcctgcgaaggcgcgcgcctgcgcacc
gaagcgcgtttcgtcaagatcggccagggcgagcagcagcgcgccatctacgaggtgtcc
gataaacccctgcgcgaaacgctggactatttcgacaagctggagctcagtggcgccaag
cgcgacatcgccgagcgcgtgatcaaggaaatcgtgtcgcgcctgaagttcctgaacaac
gtcggcctcgactacctgtcgctcgaccgcagcgcggataccctgtccggcggcgaagcc
cagcgtatccgcctggcctcgcagatcggttcgggcctgaccggcgtcatgtacgtgcta
gacgaaccgtcgatcggcctgcaccagcgcgacaacgatcgcctgatcgcgacgctgaag
catttgcgcgacatcggcaatagcgtgctggtggtcgagcacgacgaagacgcgatccgc
accgccgactacatcgtcgacatgggtccgggcgcgggcgtgcacggcggcgccgtgatc
gccgagggcacgctcgagcagatcatgaacaacgagcattcgctgaccgcccagtacctg
gacggccggcgcaagatcgaagtgccgaagaagcgcaccaaggccgatccggcgcgccag
ctggtgatcacgggcgcgaaaggtaataacctgaaggatgtgaccctgaccttgccggtg
ggcctgatgacttgcgtgacgggcgtgtcgggttcgggcaagtcgacgctcatcaacgac
acgctgtatccggcgctgtcgcgccacctgtacggttcgcagaccgaaccggccgagcac
agctcgatccacggcctggaacacttcgacaaggtgatctcggtcgaccaggcgccgatc
ggccgcacgccgcggtcgaaccccgcgacctatactggcctcttcacgccgatccgcgac
ctgttcgcgaccgtgccgaccgccaaggaacgcggatacagcgccggccgcttctcgttc
aacgtcaagggcggccgctgcgaagcctgccagggcgatggcgtgatcaaggtcgagatg
cacttcctgccggacgtgtacgtgccgtgcgacgtctgccatggcaagcgctacaaccgc
gaaacgctggaagtgcagtacaagggcaagaacatcaccgaagtactggacatgacggtc
gaggatgcgcacgagttcttcaagccggtgccggtcatcgcgcgtaaactccagaccttg
ctggacgtgggcctgggctatatcaagctgggacagagcgcgaccaccctgtcgggcggc
gaggcgcagcgcgtcaagctgtcgctcgagctgtccaagcgcgacaccggacgcacgctg
tacatcctggacgaaccgaccaccggcctgcacttcgccgacatcgacctgctgctgaag
gtgatccaccgcctgcgcgaccagggcaatacgctcgccatcatcgagcacaacctggac
gtgatcaagaccgcggactggatcgtcgacttgggaccggaaggcggcgccggcggcggc
atgatcgtggcgtcgggtacgccggagcaagtggccaaggtcaaggacagcccgacgggc
aagtacctgaagccgttgctgaagggttga
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