Massilia oculi: DIR46_15695
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Entry
DIR46_15695 CDS
T05448
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mtim
Massilia oculi
Pathway
mtim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DIR46_15695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtim03400
]
DIR46_15695
Enzymes [BR:
mtim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DIR46_15695
DNA repair and recombination proteins [BR:
mtim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DIR46_15695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF4130
Motif
Other DBs
NCBI-ProteinID:
AWL05725
UniProt:
A0A2S2DK20
LinkDB
All DBs
Position
3436937..3438502
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AA seq
521 aa
AA seq
DB search
MNASAGAAALAATAVENVRAGRPLLVDGFTAWRAVARELLRAGVPPEAVTWGAPGADLFS
GAPASQAAAHHGGDLLATPAEPQAGEPEPSNAATPRPPRPQVPRSLMEMLQTAACYRDHD
RWAFLYRVIWRWQQGEHDVQSPADPDGQRLHAMVKAVRREVHDMHAYIRFRERPIEAGAP
HFVAWFEPAHDVLPQVAEHFVARMGKVSWMIATPDASVLWDGAILHHTGPLMSSAADLDD
AGEALWLTYYRSIFNPARLNTQVMNSHIPSRFWKNLPEGALVPSLVSQAGLGARRIGQVE
AVGRRSGRTISIEAEQAQPERQQPSKLDECRRCDLWEHATQAVGGEGPEHSRIMLVGEQP
GDQEDLAGQPFVGPAGKLLDRVFEQAGVERKGVYITNAVKHFKWEPRGKRRLHKTPAQKE
IEACHYWLEKEIATRKPKVIVAMGATALKSVLQTGSATLKDKLGRPVRHGDSWVVTIYHP
SYVLRVPDEASKQEAFSVMVEGLKLAQELLDRPDVPEPPEG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgagtgccggcgccgccgccctcgccgcgaccgcggtggagaacgtgcgcgcg
ggccggccgctgctggtggacggcttcaccgcatggcgcgcggtggcgcgcgaactgctg
cgcgccggcgtgccgcccgaggcggtgacctggggtgcgccgggcgccgacctgttctcg
ggtgcgccggcatcccaagccgctgcgcatcatggaggcgacctcctggcgactccggca
gaaccgcaagcgggcgaaccggagccttccaatgcagcgacgccaaggccgccgaggcca
caagttccccgctccctgatggagatgttgcagaccgccgcctgctaccgcgaccatgac
cgctgggccttcctgtaccgggtgatctggcgctggcagcagggcgagcacgacgtgcaa
tcgcccgccgatccggacgggcagcggctgcacgcgatggtcaaggcggtgcggcgcgag
gtacacgatatgcacgcctatatccgattccgcgaacggccgatcgaggccggcgcgccc
catttcgtggcctggttcgaacccgcccatgacgtcctgccgcaagtcgccgagcatttt
gtggcgcgcatgggcaaggtgagctggatgatcgccacgcccgacgccagcgtgctgtgg
gacggcgccatcctgcaccacaccggtcccctgatgtcgagcgcggccgatctcgacgac
gccggcgaggccttgtggctgacctattaccgcagcatcttcaacccggcgcgcctgaac
acgcaggtgatgaacagccacatcccgtcacgcttctggaagaatctgccggaaggcgcg
ctggtgccgtcgctggtgagccaggccggccttggcgcgcgccgcatcggccaggtcgag
gccgtaggaaggcgcagcggccgcacgatctcgatcgaggccgagcaggcgcagcccgag
cgccagcagccgtcgaagctggacgagtgccggcgttgcgacctgtgggaacacgcgacc
caggcggtgggcggcgaaggaccagaacattcaagaatcatgctcgtcggcgaacagccg
ggcgaccaggaagacctggccggccagcccttcgtcggcccggccggcaagctgctcgac
cgcgtgttcgaacaggccggcgtggagcgcaagggcgtctacatcaccaacgccgtcaag
catttcaaatgggagccgcgcggcaagcggcgcctgcacaagacgccggcgcagaaggag
atcgaggcctgccactactggctcgagaaggagatcgccacccgtaaacccaaggtcatc
gtggcgatgggcgcgaccgcgctcaagtcggtgctgcagaccggcagcgcgacgctcaag
gacaagctggggcggccggtgcgccatggcgacagctgggtggtgacgatctaccacccg
tcgtacgtgctgcgcgtgcccgacgaagcgtccaagcaggaggcgttttcggtgatggtc
gagggcttgaagctggcgcaggaattattggaccggcccgacgtgccggagccgccggaa
ggctga
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