Massilia oculi: DIR46_16275
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Entry
DIR46_16275 CDS
T05448
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
mtim
Massilia oculi
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtim03016
]
DIR46_16275
Transfer RNA biogenesis [BR:
mtim03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DIR46_16275
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GFIT
Motif
Pfam:
ThiF
Clr5
Shikimate_DH
Sacchrp_dh_NADP
Cons_hypoth95
ApbA
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AWL05829
UniProt:
A0A2S2DL56
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All DBs
Position
3560529..3561425
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AA seq
298 aa
AA seq
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MNQINTQLFSATLDEEVDFARRFGGIARLYGEHALERFRSAHVCVIGVGGVGSWVVEALA
RSAVGRLTLIDLDNVAESNINRQIQALSSTVGMAKIEALKQRIAQINPFCQVTLVEDFID
PENIPAMIGDKDIDYVVDAIDSVKPKAALIAWCSANRMPLVVVGGAGGQIDPTKVEIRDL
ARTEQEPLLKKVRKILRAQYGFSRGEKQKYHIDAVFSMEPLRYPDAGDACDVDPNSITGL
NCAGFGSSMVVTATFGMVTAGQVLRRLAEAAAAAKAAEVEAQAVPAVQAVQAEEALLS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagatcaacactcagctcttttcggcaacgttggacgaagaagtcgacttcgcg
cggcgctttggcggcattgcccgcctgtatggcgagcatgcgctggaacgttttcgctct
gcacacgtttgcgtgatcggcgtcggcggcgtcggctcgtgggtggtcgaggcgctggcg
cgcagcgcggtcggccgcctgaccctgatcgacctcgacaatgtggcggaatcgaacatc
aaccgccagatccaggcgctgtcgtccaccgtcggcatggccaagatcgaggcgctcaag
cagcgcatcgcccagatcaatccgttctgccaggtcacgctggtcgaggattttatcgat
cccgagaatatcccggcaatgatcggcgataaggatatcgattacgtcgtcgacgccatc
gacagcgtgaagccgaaggcggccctgatcgcctggtgcagcgccaacaggatgccgctg
gtggtggtgggcggcgcgggcggccagatcgatccgaccaaggtcgagatccgcgacctg
gcccgtaccgagcaagaaccgctgctcaagaaagtgcgcaagatcctgcgcgcacaatat
ggattctcgcgcggcgagaagcagaaataccatatcgatgccgtgttctcgatggagccg
ctgcgttatcccgacgctggcgatgcctgcgatgtcgacccgaacagcatcaccggcctg
aattgcgccggcttcggctccagcatggtggtcaccgccaccttcggcatggtgaccgcg
ggccaggtgttgcgccgcctggccgaggcggcggctgccgccaaggctgcagaggtggag
gcccaggctgtcccggcagtgcaagctgtgcaagccgaagaggccttgttatcataa
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