Massilia oculi: DIR46_17175
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Entry
DIR46_17175 CDS
T05448
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mtim
Massilia oculi
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtim03016
]
DIR46_17175
Enzymes [BR:
mtim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DIR46_17175
Transfer RNA biogenesis [BR:
mtim03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DIR46_17175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AWL05993
UniProt:
A0A2S2DKU2
LinkDB
All DBs
Position
3763850..3765892
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AA seq
680 aa
AA seq
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MNVFFEESGDFKVGAILSQAGEAYQVEMPSGKRTKVKTRDVLLQFDKPEPQALLDAAKAI
VLDVDLDFLWEVAGEEEFGFAELGAEYFGHAPLPHEAAGLVLALHGSPIYFYKKGRGRYK
AAPEQSLKAALAGIEKKKQQAIVQAGYVEELKAGKLPASMQQIVHQLLFKPDKNTIEYKA
FETAASELQTSAPRLMLDVGGLASPKELHMGRFLFEHFPRGAGFAPVEIPKAPGDLPLAN
VAAFSIDDVTTTEIDDAFSVVRLDDGSVQVGIHIAAPGLGIRPDDAIDKIARARMSTVYM
PGDKITMLPDEVVNAFTLAEGNDCPALSLYAVLDPSDWSVKSTTTRAERVPVKNNLRHND
LDHVVNEETLESGAGDYPHKDELGLLWKWALQLEAGRMKKREAFGLKPEQANRVDFNFYV
EDDVVSIVRRKRGAPLDKIVAELMIFANSTWGKLLHDSGVPGIYRSQTPGAGGWAAKMQV
RMVTHAAPHQGLGVDQYAWSTSPLRRYTDLVNQWQILAAAEHGVTAPLVAPFKHRDATLF
AIVSSFDAAYSAYNDFQQNMERYWCLRWLGQENVKQADAVVLKDELVRLVDVPLVVRLTG
MPSAPRGAQVKLDIVRWDEIDLQLEARLLEVASAEPDASLDYEEEADTGEAAVAEVVEAE
GAVAAVDTGDAPQPAPASAQ
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtatttttcgaggaatcgggcgacttcaaggtcggcgccatcctgtcgcaagcg
ggcgaggcctaccaggtggagatgccgagcggtaagcgcaccaaggtcaagacgcgcgac
gtgctgctgcagttcgacaagcccgagccgcaagccctgctggatgcggccaaggcgatc
gttcttgatgtcgatctcgacttcctgtgggaagtcgcgggcgaagaagaattcggtttc
gccgagctgggcgccgaatacttcggccacgcgccgctgccgcacgaagcggccggcctg
gtgctggccctgcacggttcgccgatctatttctacaagaagggccgcggccgctacaag
gcggcgccggaacagtcgctcaaagccgcgctggccggcatcgaaaagaaaaagcagcag
gccatcgtccaggccggctatgtggaagaactgaaagcgggcaagctgcccgcttcgatg
cagcagatcgtgcaccagctgctgttcaagcccgacaagaacaccatcgaatacaaggcc
ttcgagacggccgccagcgaactgcagaccagcgcgccgcgcctgatgctggacgtcggc
ggcctggcctcgcccaaggagctgcacatgggccgcttcctgttcgagcacttcccgcgc
ggcgccggtttcgcgcccgtggagatcccgaaggcgccgggcgacctgccgctggccaac
gtggccgccttctcgatcgacgacgtcactaccaccgagatcgacgacgccttctcggtc
gtgcgcctggacgacggcagcgtgcaggtcggcatccacatcgcggcgccgggcctgggc
atccgcccggacgacgcgatcgacaagatcgcccgcgcgcgcatgtcgaccgtgtatatg
cctggcgacaagatcacgatgctgccggacgaggtggtgaatgccttcaccctggccgag
ggcaacgattgcccggccttgtcgctgtacgccgtgctcgatccgagcgactggagcgtc
aagtcgaccacgacccgcgccgagcgcgtgccggtcaagaacaacctgcgccacaacgac
ctcgatcacgtggtcaatgaagaaacgctggagagcggcgcgggcgactatccgcacaag
gacgagctgggcctgctgtggaagtgggcgctgcagctggaagcgggccgcatgaagaag
cgcgaggccttcggcctcaagccggaacaggcgaaccgggtcgacttcaatttctacgtc
gaggacgacgtggtctcgatcgtgcgccgcaagcgcggcgcgccgctggacaagatcgtg
gccgagctgatgatcttcgccaacagcacctggggcaagctgctgcacgactcgggcgtg
ccgggcatctaccgctcgcagacgccgggcgccggcggctgggccgccaagatgcaggtg
cgcatggtcacgcacgcggcgccgcaccagggcctgggcgtggaccagtacgcctggagc
acctcgccgctgcgccgctacaccgacctggtcaaccagtggcagatcctggccgccgcc
gaacacggcgtgacggcgccgctggtggccccgttcaagcaccgcgacgcgaccctgttc
gcgatcgtctcgagcttcgacgcggcctattcggcctataacgacttccagcagaacatg
gagcgctactggtgcctgcgctggctggggcaggagaacgtcaagcaggccgacgccgtc
gtgctgaaggacgagctggtgcgcctggtcgacgtgccgctggtggtgcgcctgaccggc
atgccctcagcgccgcgcggcgcccaggtgaaactcgacatcgtgcgctgggacgagatc
gacctgcagctcgaagcgcgcctgctcgaagtggcgtccgccgaaccggatgcatcgctc
gactacgaggaagaagcggacaccggcgaagcggccgtggccgaggtggtcgaggccgaa
ggcgcggtggcggcggtcgataccggggatgcgccgcagccggcgccggcgtcggcgcag
taa
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