Massilia oculi: DIR46_17355
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Entry
DIR46_17355 CDS
T05448
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
mtim
Massilia oculi
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtim03016
]
DIR46_17355
Enzymes [BR:
mtim01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DIR46_17355
Transfer RNA biogenesis [BR:
mtim03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DIR46_17355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AWL06024
UniProt:
A0A2S2DL11
LinkDB
All DBs
Position
complement(3804414..3805775)
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AA seq
453 aa
AA seq
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MQKKVFIKTFGCQMNEYDSDKMVDVLGASDGLVRTDTPEDADVILFNTCSIREKSQEKVF
SDLGRIKELKRKNPELVIGVGGCVASQEGDAIVKRAPYVDVVFGPQTLHRLPQLIQDRRQ
SGKAQVDISFPEIEKFDFLPPAKVEGPVAYVSIMEGCSKYCSYCVVPYTRGEEVSRRFED
VLTEVAGLAAQGVKEIMLLGQNVNAFRGAMESGETADFALLLEYIAEIPGIERLRFVTSH
PKEFSQRLIDAYARIPQLVSHLYLPVQHGSDRVLGAMKRGYTGLEYKSIIRRLRAVRPDM
TFSSDFIVGFPGETEADFEAMMKLVEDVNFDNSFSFIFSKRPGTPAANLEDDTPHEVKLA
RLQRLQALIDANTRKHSAAMVGTVQRVLVEGVAKKDATQLQGRAENNRVVLFPLDETNAS
LIGQLADVRIAASHDYYLRGELVANLDTIAKAS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaagtattcatcaaaaccttcggctgccagatgaacgagtacgactcggac
aagatggtcgacgtccttggcgcctcggatggactggtgcgcaccgacacgcccgaagac
gcggatgtgatcctgttcaatacctgttcgatccgcgaaaaatcacaagaaaaagtgttc
tccgacttgggccgtatcaaggaactcaagcgcaagaatcctgagctggtcatcggcgtg
ggcggctgcgttgcgtcgcaagaaggcgacgccatcgtcaagcgcgcgccctacgtcgac
gtggtgttcggcccgcagaccctgcaccgcctgccccagctgatccaggaccggcgccag
tcgggcaaggcgcaagtcgacatcagcttccccgagatcgaaaaattcgacttcttgcca
ccagccaaggtcgaaggcccggttgcctacgtctcgatcatggaaggctgcagcaaatac
tgcagctactgcgtcgtgccctacacccgcggcgaggaagtctcgcgccgcttcgaggac
gtgctgaccgaagtcgccggcctcgctgcccagggtgtgaaggaaatcatgctgctgggc
cagaacgtgaacgccttccgcggcgccatggaaagcggcgagacggccgacttcgccctg
ctgctcgaatacatcgccgagatccccggcatcgaacgcctgcgcttcgtcaccagccat
ccgaaggaattcagccagcgcctgatcgacgcctatgcgcggatcccgcaactggtcagc
cacctctacctgccggtgcagcacggctccgaccgcgtcctgggcgccatgaagcgcggc
tataccggcctcgagtacaagtcgatcatccgccgcctgcgcgcggtgcgaccggacatg
accttctcgtccgacttcatcgtcggtttcccgggcgagaccgaggccgacttcgaggcc
atgatgaagctggtcgaggacgtgaacttcgacaatagcttcagctttatcttcagcaag
cgcccaggcacgccggccgcgaacctcgaagacgacaccccgcacgaagtcaagctggcg
cgcctgcagcgcctgcaagccctgatcgatgccaatacccgcaagcacagcgccgccatg
gtcggcaccgtgcagcgggtgctggtcgaaggcgtcgccaagaaggacgccacccagttg
cagggccgcgccgagaacaaccgcgtggtcctgttcccgctggacgagacgaatgcttcc
ctgatcggccagctggccgacgtgcgcatcgccgccagccacgattactatttgcgcggc
gaactcgtcgccaacctcgatacgatagccaaagccagttga
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