Massilia oculi: DIR46_17840
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Entry
DIR46_17840 CDS
T05448
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mtim
Massilia oculi
Pathway
mtim03030
DNA replication
mtim03430
Mismatch repair
mtim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DIR46_17840
03430 Mismatch repair
DIR46_17840
03440 Homologous recombination
DIR46_17840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtim03032
]
DIR46_17840
03400 DNA repair and recombination proteins [BR:
mtim03400
]
DIR46_17840
Enzymes [BR:
mtim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DIR46_17840
DNA replication proteins [BR:
mtim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DIR46_17840
DNA repair and recombination proteins [BR:
mtim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DIR46_17840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Mrr_cat
Motif
Other DBs
NCBI-ProteinID:
AWL06112
UniProt:
A0A2S2DL61
LinkDB
All DBs
Position
3928813..3932307
Genome browser
AA seq
1164 aa
AA seq
DB search
MTSPTFTHLRVHSEYSIVDGLVRIDDLVKAAVKDNQPALAVTDLANTFCLVRFYKAARGK
GIKPIVGVDAWITNDDNRDKPHRLLILAKNHTGYLQLCDLLARAWLTNQHKGRAEIRTEW
LEALATSVSTLHPEEPQANALIVLSGAHFGDVGQAIENGDLAKAEANAARWAKIFPGHFY
IEIQRAGQPNQEQQVRHSVALAGRLGLPVVATHPVQFLDKSEFIAHEARVCIAEGEMLAN
AKRVRRFNENMCFKSQDEMLELFKDLPGALANSVEIAKRCNVTLTLGKPQLPNFPTPGMT
IDEFLVAETRKGLEERLVQLYPDPVKREQERPRYEARLEFENKTIINMKFPGYFLIVAEF
IQWGKNNGVPIGPGRGSGAGSLVAYALKITDLDPLKYNLLFERFLNPERVSMPDFDIDFC
QEKRELVIQHVKDLYGRDAVSQIATFGTMAAKGAIRDVGRVLDFGYNFCDGISKLIPFKP
GKPVSIAEAIEEEPLLKERLENEEEVKQLLDLAQQVEGITRGIGMHAGGVLIAPGKLTDF
CPLYTQGGDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVNYIKDLDPAESEFDLA
KLPLDDRASYKLLSDAKTVAIFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIP
DFCKRKHGEKFDYPDPRTESILSETYGIMVYQEQVMQMAQIVGGYSLGGADMLRRAMGKK
KAEEMAEHREIFRAGAAKDGLSTEKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLK
VHHTAAFMAANMSLAMEDTEKIKILVEDAKEVCKLVILPPDVNESQFRFTPEGEPKSRTG
KQVTNIRYGLGGVKGAGQGAIEAIIAARKEGGKFKDLFDFCKRVDRKQINRRTIESLIRA
GAMDAFGVDRAVLLASVAFAMEAAGQAAAAANQVSLFGGDDSDLVAPPEYVKATPWTDRQ
KLSEEKIALGYYLSGHMFDSYAQEVRRFAKTKLKDLEPSRDPRMMCGVITGVRTQMTQRG
KILIVALDDKTAVHEVTIYSEVAEANKHALKEDEFLLVVGKVSEDRFNGGLRITAEKVFD
IAASRIQYGHKLEMDLATTVDPAKIAEVLQPYRVQDGMPVSLRLVTNGIPYVVQLGDDWR
VGPSDTLKQALELGLGAKDVAVEY
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgacttccccgactttcacccacctgcgcgtccactccgaatactccatcgtcgacggc
ctggtccgcatcgacgacctggtcaaggcggccgtcaaggacaaccagccggcgctggcc
gtgaccgacctggccaataccttctgcctggtgcgtttctacaaggcggcgcgcggcaag
ggcatcaagccgatcgtcggggtcgacgcctggatcaccaacgacgacaaccgcgacaag
ccgcaccgcctgctgatcctggccaagaaccacaccggctacctgcagctgtgcgacctg
ctggcgcgcgcctggctcaccaaccagcacaagggccgcgccgagatccgcaccgagtgg
ctggaagcgctggcgacgtccgtctcgaccctgcatcccgaggagccccaggccaatgcc
ctgatcgtgctgtcgggcgcccatttcggcgacgtcggccaggcgatcgagaacggcgac
ctggcaaaggccgaggccaatgccgcgcgctgggcgaagatcttcccgggccacttctac
atcgagatccagcgcgccggccagcccaaccaggagcagcaggtgcgccattcggtggcg
ctggccggccgcctggggctgccggtggtggcgacgcatccggtgcagttcctggacaag
agcgaattcatcgcccacgaagcgcgtgtgtgtatcgccgaaggcgagatgctggccaac
gccaagcgcgtgcgccgcttcaacgagaatatgtgcttcaagtcgcaggacgagatgctt
gaattgttcaaggacttgccgggcgcgctggccaattcggtcgagatcgccaagcgctgc
aacgtcacgctcacgctgggcaagccgcagctgccgaatttcccgaccccgggcatgacg
atcgacgaattcctggtcgccgagaccaggaaggggctcgaggaacgcctggtgcagttg
tatcccgaccccgtgaaacgcgagcaggagcgtccgcgctacgaggcgcgactggagttc
gagaacaagacgatcatcaacatgaagttcccgggctacttcctgatcgtcgcggagttc
atccagtggggcaagaacaacggcgtgccgatcggcccgggccgcggctcgggcgcgggt
tccctcgtcgcgtatgccctcaagatcaccgacctcgatccgctcaagtacaacctgctg
ttcgagcgtttcctgaacccggaacgcgtctcgatgcccgacttcgacatcgacttctgc
caggaaaagcgcgaactggtgatccagcacgtgaaggacctgtacggccgcgacgcggtg
tcgcagatcgccaccttcggcaccatggcggccaagggcgcgatccgcgacgtcggtcgc
gtgctcgacttcggctacaacttctgcgacggcatttccaagctgatcccgttcaagccg
ggcaaaccggtctcgatcgccgaggcgatcgaggaagaaccgctgctcaaggaacgcctc
gaaaacgaagaagaagtcaaacagctgctcgacctggcgcaacaggtcgagggcatcacg
cgcggcatcggcatgcacgccgggggcgtgctgatcgcgccgggcaagctcaccgacttc
tgcccgctgtacacccagggcggcgacgccggcgtggtgtcgcagtacgacaaggacgac
gtggaggccgtgggcctggtcaagttcgactttttgggattgaccacgctgaccatcctc
gaccgcgccgtcaactacatcaaggatcttgacccggccgagagcgaattcgacctggcc
aagctgccgctggacgaccgcgcctcgtacaaattgctgagcgacgccaagacggtcgcg
atcttccagctggagtcgcgcggcatgcagggcatgctgaaggacgcgcgtcccgaccgc
ttcgaggacatcatcgcgctggtggcgctgtaccgtccgggcccgatggacctgatcccc
gacttctgcaagcgcaagcacggcgagaagttcgattatcccgatccgcgcaccgagtcg
atcctgtccgagacctacggcatcatggtctaccaggagcaggtgatgcagatggcgcag
atcgtgggcggctactcgctgggcggcgccgacatgctgcgccgcgcgatgggcaagaag
aaagccgaagagatggccgagcaccgcgagatcttccgcgccggcgcagccaaggacgga
ctgtcgaccgagaaggccgacgagatcttcgatctgatggaaaagttcgcgggctacggc
ttcaacaagtcgcacgcggccgcctatgcgctgctgtcctaccataccgcctatctcaag
gtgcaccataccgccgcgttcatggcagccaatatgtcgctggcgatggaagacaccgag
aagatcaagatcctggtcgaggatgcgaaagaggtctgcaagctcgtgatcctgccgccg
gacgtcaacgaatcgcagttccgcttcacgcccgaaggcgagccgaagtccaggaccggc
aagcaggtgaccaatatccgctacggcctgggcggcgtgaagggcgcgggacagggcgcg
atcgaggccatcatcgccgcgcgcaaggaaggcggcaagttcaaggacctgttcgatttc
tgcaagcgggtcgaccgcaagcagatcaaccgccgcaccatcgagtccttgatccgtgcc
ggggccatggacgccttcggcgtcgaccgcgcggtgctgctggcctccgtcgccttcgcg
atggaagcggccggccaggcggcggcggccgccaaccaggtcagcctgttcggcggcgac
gattccgacctggtggcgccgcccgagtacgtcaaggccacgccctggaccgaccgccag
aagctgtccgaagaaaagatcgcgctcggctactacctgtcgggccatatgttcgactcg
tatgcgcaagaggtgcggcgcttcgccaagaccaagctgaaagacctggaaccgtcgcgc
gacccgcgcatgatgtgcggcgtgatcaccggcgtgcgcacccagatgacccagcgcggc
aagatcctgatcgtggcgctggacgacaagaccgcggtgcacgaggtgacgatctacagc
gaggtggccgaggccaacaagcacgccctcaaggaagacgagttcctgctggtggtcggc
aaggtgtccgaagaccgcttcaacggcggcttgcgcatcacggccgagaaggtgttcgac
atcgcggcgtcgcgcatccagtacgggcacaagctcgagatggatctggctaccaccgtc
gatccggcaaagatcgccgaagtgctgcaaccttaccgggtgcaggacgggatgccggtg
agcctgcgcctggtcaccaatgggatcccctatgtcgtgcagttgggcgacgactggcgc
gtggggccgtcggatacgctcaagcaggcgctcgaactgggccttggcgcgaaggacgtc
gcggtcgaatactga
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