Massilia oculi: DIR46_19105
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Entry
DIR46_19105 CDS
T05448
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
mtim
Massilia oculi
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtim03009
]
DIR46_19105
Enzymes [BR:
mtim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
DIR46_19105
Ribosome biogenesis [BR:
mtim03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DIR46_19105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
NPFF
Orexin
Motif
Other DBs
NCBI-ProteinID:
AWL06330
UniProt:
A0A2S2DLT3
LinkDB
All DBs
Position
4231894..4232916
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AA seq
340 aa
AA seq
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MKDLERISGKTERMATQNDVVPPSSQQALQAQFVTIGEEDAGQRIDNYLLRVCKGVPKSH
IYRILRSGEVRVNKGRIDQLYRLAEGDTVRIPPIRIAEKARNDTVPGTEFPIVFEDAHLL
VINKPAGVAVHGGSGVSYGVIEQLRAARPQAKFLELVHRLDRETSGLLLIGKKRSALTNL
HDQMRDGTTDKRYFAAVKGDWHNKRQHVKLPLHKYTTADGEKRVVVQAGGQEAHTIFNLL
KKWQDFALLEAELKTGRTHQIRVHLASSGFPILGDEKYGDFAFNKQLHKAGQGRGALKRM
FLHAHQITFTHPDSGERMTLRAPMPEECERFLVSLGAHSA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacttagagagaatttctgggaagacagagcgaatggcgacccaaaacgatgtt
gttcccccttcatcacaacaggctctgcaggcgcaatttgtcacaatcggcgaagaagac
gccggacagcgtatcgataactacctgttgcgtgtctgcaaaggcgtaccgaagagtcat
atctaccgcatcctccgttcaggtgaggtacgtgtcaacaagggccggatcgaccagctc
taccgcctggccgagggcgataccgtgcgcatcccgccgatccgcatcgccgagaaggcc
cgcaacgacaccgtgccggggaccgaattccccattgtcttcgaagacgcgcacttgctc
gtcattaacaagccggccggcgtggccgtccatggcggctccggcgtgtcctatggcgtg
atcgagcaattgcgcgcggcgcggccgcaagccaagttcctcgaactggtgcaccggctc
gaccgcgaaacctcgggcctgctcctgatcggcaagaagcgcagcgcgctgaccaatctg
cacgaccagatgcgcgacgggaccaccgacaagcgttatttcgcggccgtgaagggcgac
tggcacaacaagcgccagcacgtcaaactgccgctgcataagtacacgacggcggatggc
gagaagcgggtcgtggtccaggccggcggccaggaagcgcataccattttcaatctcttg
aaaaaatggcaggatttcgccttgctcgaagccgagctcaagacgggtcgcacgcaccag
atccgggtccacctggcgtcgagcggtttcccgatcctgggcgacgagaagtatggcgac
tttgcattcaataaacagttgcacaaggcgggccaggggcgcggggcgctcaagcgcatg
ttcctgcacgcgcaccagatcaccttcacgcacccggacagcggcgagcggatgaccttg
cgcgcgccgatgcctgaagaatgcgagcggttcttggtaagcttgggagcacacagtgcg
tga
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