Massilia oculi: DIR46_19125
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Entry
DIR46_19125 CDS
T05448
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
mtim
Massilia oculi
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtim03009
]
DIR46_19125
Enzymes [BR:
mtim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
DIR46_19125
Ribosome biogenesis [BR:
mtim03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DIR46_19125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
CGDB
GCV_T
Motif
Other DBs
NCBI-ProteinID:
AWL06334
UniProt:
A0A2S2DLW5
LinkDB
All DBs
Position
4236129..4236845
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AA seq
238 aa
AA seq
DB search
MSKLSLDRILQSQGFGTRKYCRALIEDGDVAVNGETVDSYKATFETDGLVLTVFDEEWPY
REHVYIALHKPANFECSRKPSHHPGVLTLLPEQFTWREVQPVGRLDHDTTGMLLMSDDGP
FIHAQSSPKRHVPKVYQATTAEPVTDELVAHMLAGVQLNDEPAPLKAVSCVQRGEHTLEI
VLEQGKYHQVKRMLAAAGNHCSALHRSQIGGLTLESLGLEEGEWCFLDQAQLDLLAPA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattgtccctagaccgtatcctgcaatcgcagggattcggcacccgcaaatat
tgccgcgcgctgatcgaggacggcgacgtcgccgtcaatggcgagaccgtcgacagctac
aaggccactttcgagaccgacggcctggtcctgaccgtgttcgacgaagaatggccttat
cgcgagcacgtctacatcgcgctccacaagccggccaacttcgaatgctcgcgcaagccg
agccaccatccgggcgtgctgacgctgctgccggaacagttcacctggcgcgaggtgcag
ccggtcggccgcctcgaccatgacaccacgggcatgctgctgatgtcggacgacggcccc
ttcatccacgcccagtcctcgcccaaacgccacgtgcccaaggtctaccaggccacgacc
gccgagccggtgaccgacgagctggtcgcccacatgctggccggcgtgcagctgaacgac
gagcctgcgccgctcaaggcggtgtcctgcgtccagcgcggcgaacataccctcgaaatc
gtcctggaacagggcaaataccaccaggtcaagcggatgctggccgccgccggcaaccat
tgcagcgcgctgcaccgctcgcagatcggcggcctgaccctggaatcgctcggcctcgaa
gaaggcgaatggtgcttcctcgaccaagctcagctcgatctgctggcgccagcctga
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