KEGG   Massilia oculi: DIR46_20860
Entry
DIR46_20860       CDS       T05448                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mtim  Massilia oculi
Pathway
mtim00010  Glycolysis / Gluconeogenesis
mtim00020  Citrate cycle (TCA cycle)
mtim00260  Glycine, serine and threonine metabolism
mtim00280  Valine, leucine and isoleucine degradation
mtim00310  Lysine degradation
mtim00380  Tryptophan metabolism
mtim00620  Pyruvate metabolism
mtim00630  Glyoxylate and dicarboxylate metabolism
mtim00640  Propanoate metabolism
mtim00670  One carbon pool by folate
mtim00785  Lipoic acid metabolism
mtim01100  Metabolic pathways
mtim01110  Biosynthesis of secondary metabolites
mtim01120  Microbial metabolism in diverse environments
mtim01200  Carbon metabolism
mtim01210  2-Oxocarboxylic acid metabolism
mtim01240  Biosynthesis of cofactors
Module
mtim_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mtim_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mtim_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
mtim_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mtim_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mtim00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DIR46_20860 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DIR46_20860 (lpdA)
   00620 Pyruvate metabolism
    DIR46_20860 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DIR46_20860 (lpdA)
   00640 Propanoate metabolism
    DIR46_20860 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DIR46_20860 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DIR46_20860 (lpdA)
   00310 Lysine degradation
    DIR46_20860 (lpdA)
   00380 Tryptophan metabolism
    DIR46_20860 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DIR46_20860 (lpdA)
   00670 One carbon pool by folate
    DIR46_20860 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mtim04147]
    DIR46_20860 (lpdA)
Enzymes [BR:mtim01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DIR46_20860 (lpdA)
Exosome [BR:mtim04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DIR46_20860 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 AlaDh_PNT_C FAD_binding_2 HI0933_like GIDA NAD_binding_8 FAD_binding_3 3HCDH_N Amino_oxidase DAO Thi4
Other DBs
NCBI-ProteinID: AWL06641
UniProt: A0A2S2DMW4
LinkDB
Position
4620672..4622108
AA seq 478 aa
MSDKQFDVVVIGGGPGGYIAAIRAAQLGFKTACIDEWSNAAGKPAPGGTCTNVGCIPSKA
LLQSSEHFEHAGHAFADHGIKVSGLELDLGTMLKRKDTIVKQNNDGILFLFKKNKVTFFH
GRGAFAGKLEADAGYTINVSGPTTDTITAKNVVVATGSNARQLPGAEFDEKLILSNTGAL
AIDAVPGKLGVIGAGVIGLEMGSVWRRVGADVTVLEGLPTFLGAVDEQIAKEAHKLFTKQ
GLKINLGCKIGAITKGANDVTVEYADSTGAEQKATFDRLIISIGRVPNTNGLGIETVGLQ
LDERGFVVVDDECRTSLPGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIP
WVIYTSPEIAWVGKTEQQLKAEGVQYKAGTFPFMANGRARALGDTSGMVKFLADATTDEI
LGVHIVGPMASELISEAVVAMEFKASSEDIARICHAHPSLSEATKEAALAVDKRSLNF
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgagcgataaacaatttgacgtcgtcgtgatcggcggcggtcctggcggctacatcgcc
gccatccgcgctgcccagctgggcttcaagaccgcctgcatcgacgagtggagcaacgcc
gccggcaagcctgccccgggcggcacctgcaccaacgtcggctgcatcccgtcgaaagcg
ctgctgcaatcgtcggagcacttcgagcacgccggccacgccttcgccgaccacggcatc
aaggtgtcgggcctggaactcgacctgggcaccatgctcaagcgcaaggacaccatcgtc
aagcagaacaacgacggcatcctgttcctgttcaagaagaacaaggtcaccttcttccac
ggccgcggcgccttcgccggcaagctcgaggccgatgcgggctacaccatcaacgtttcg
ggcccgaccaccgataccatcaccgcgaaaaacgtggtggtggcgaccggttcgaacgca
cgccagctgccaggcgctgaattcgacgagaagctgatcctgtcgaacaccggcgcactg
gcgatcgacgccgtgccgggcaagctcggcgtgatcggcgccggcgtcatcggcctggaa
atgggcagcgtgtggcgccgtgtcggcgccgacgtcacggtgctggaaggcctgccgacc
ttcctgggcgcggtcgacgagcagatcgccaaggaagcccacaagctgttcaccaagcag
ggcctgaagatcaacctgggctgcaagatcggcgcgatcaccaagggcgccaacgacgtc
accgtcgaatacgccgattcgaccggcgcggaacagaaagcgactttcgaccgcctgatc
atctcgatcggccgcgtgccgaacaccaacggcctcggcatcgagaccgtcggcctgcag
ttggatgagcgcggcttcgtggtggtcgacgacgaatgccgcaccagcctgcctggcgtg
tgggcggtgggcgacgtcgtgcgcggcccgatgctggcgcacaaggccgaggaagaaggc
gtggcggttgccgagcgcatcgccggccagcacggccacgtgaacttcaacaccatcccc
tgggtcatctacacctcgccagagattgcatgggtcggcaagaccgaacagcagctgaag
gcagaaggcgtgcagtacaaggccggcaccttcccgttcatggccaacggccgtgcgcgc
gcgctgggcgacacctcgggcatggtcaagttcctggccgatgccacgaccgatgaaatc
ctgggcgtgcacatcgtcggtccgatggcgtccgagctgatctcggaagccgtggtcgcg
atggagttcaaggcctcgtcggaagacatcgcccgcatctgccacgcgcacccgtcgctg
tcggaagcgaccaaggaagccgcgctggcggtggacaagcgttcgcttaatttttaa

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