Massilia oculi: DIR46_20860
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Entry
DIR46_20860 CDS
T05448
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mtim
Massilia oculi
Pathway
mtim00010
Glycolysis / Gluconeogenesis
mtim00020
Citrate cycle (TCA cycle)
mtim00260
Glycine, serine and threonine metabolism
mtim00280
Valine, leucine and isoleucine degradation
mtim00310
Lysine degradation
mtim00380
Tryptophan metabolism
mtim00620
Pyruvate metabolism
mtim00630
Glyoxylate and dicarboxylate metabolism
mtim00640
Propanoate metabolism
mtim00670
One carbon pool by folate
mtim00785
Lipoic acid metabolism
mtim01100
Metabolic pathways
mtim01110
Biosynthesis of secondary metabolites
mtim01120
Microbial metabolism in diverse environments
mtim01200
Carbon metabolism
mtim01210
2-Oxocarboxylic acid metabolism
mtim01240
Biosynthesis of cofactors
Module
mtim_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mtim_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mtim_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
mtim_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mtim_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DIR46_20860 (lpdA)
00020 Citrate cycle (TCA cycle)
DIR46_20860 (lpdA)
00620 Pyruvate metabolism
DIR46_20860 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DIR46_20860 (lpdA)
00640 Propanoate metabolism
DIR46_20860 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DIR46_20860 (lpdA)
00280 Valine, leucine and isoleucine degradation
DIR46_20860 (lpdA)
00310 Lysine degradation
DIR46_20860 (lpdA)
00380 Tryptophan metabolism
DIR46_20860 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DIR46_20860 (lpdA)
00670 One carbon pool by folate
DIR46_20860 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtim04147
]
DIR46_20860 (lpdA)
Enzymes [BR:
mtim01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DIR46_20860 (lpdA)
Exosome [BR:
mtim04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DIR46_20860 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
AlaDh_PNT_C
FAD_binding_2
HI0933_like
GIDA
NAD_binding_8
FAD_binding_3
3HCDH_N
Amino_oxidase
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
AWL06641
UniProt:
A0A2S2DMW4
LinkDB
All DBs
Position
4620672..4622108
Genome browser
AA seq
478 aa
AA seq
DB search
MSDKQFDVVVIGGGPGGYIAAIRAAQLGFKTACIDEWSNAAGKPAPGGTCTNVGCIPSKA
LLQSSEHFEHAGHAFADHGIKVSGLELDLGTMLKRKDTIVKQNNDGILFLFKKNKVTFFH
GRGAFAGKLEADAGYTINVSGPTTDTITAKNVVVATGSNARQLPGAEFDEKLILSNTGAL
AIDAVPGKLGVIGAGVIGLEMGSVWRRVGADVTVLEGLPTFLGAVDEQIAKEAHKLFTKQ
GLKINLGCKIGAITKGANDVTVEYADSTGAEQKATFDRLIISIGRVPNTNGLGIETVGLQ
LDERGFVVVDDECRTSLPGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIP
WVIYTSPEIAWVGKTEQQLKAEGVQYKAGTFPFMANGRARALGDTSGMVKFLADATTDEI
LGVHIVGPMASELISEAVVAMEFKASSEDIARICHAHPSLSEATKEAALAVDKRSLNF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataaacaatttgacgtcgtcgtgatcggcggcggtcctggcggctacatcgcc
gccatccgcgctgcccagctgggcttcaagaccgcctgcatcgacgagtggagcaacgcc
gccggcaagcctgccccgggcggcacctgcaccaacgtcggctgcatcccgtcgaaagcg
ctgctgcaatcgtcggagcacttcgagcacgccggccacgccttcgccgaccacggcatc
aaggtgtcgggcctggaactcgacctgggcaccatgctcaagcgcaaggacaccatcgtc
aagcagaacaacgacggcatcctgttcctgttcaagaagaacaaggtcaccttcttccac
ggccgcggcgccttcgccggcaagctcgaggccgatgcgggctacaccatcaacgtttcg
ggcccgaccaccgataccatcaccgcgaaaaacgtggtggtggcgaccggttcgaacgca
cgccagctgccaggcgctgaattcgacgagaagctgatcctgtcgaacaccggcgcactg
gcgatcgacgccgtgccgggcaagctcggcgtgatcggcgccggcgtcatcggcctggaa
atgggcagcgtgtggcgccgtgtcggcgccgacgtcacggtgctggaaggcctgccgacc
ttcctgggcgcggtcgacgagcagatcgccaaggaagcccacaagctgttcaccaagcag
ggcctgaagatcaacctgggctgcaagatcggcgcgatcaccaagggcgccaacgacgtc
accgtcgaatacgccgattcgaccggcgcggaacagaaagcgactttcgaccgcctgatc
atctcgatcggccgcgtgccgaacaccaacggcctcggcatcgagaccgtcggcctgcag
ttggatgagcgcggcttcgtggtggtcgacgacgaatgccgcaccagcctgcctggcgtg
tgggcggtgggcgacgtcgtgcgcggcccgatgctggcgcacaaggccgaggaagaaggc
gtggcggttgccgagcgcatcgccggccagcacggccacgtgaacttcaacaccatcccc
tgggtcatctacacctcgccagagattgcatgggtcggcaagaccgaacagcagctgaag
gcagaaggcgtgcagtacaaggccggcaccttcccgttcatggccaacggccgtgcgcgc
gcgctgggcgacacctcgggcatggtcaagttcctggccgatgccacgaccgatgaaatc
ctgggcgtgcacatcgtcggtccgatggcgtccgagctgatctcggaagccgtggtcgcg
atggagttcaaggcctcgtcggaagacatcgcccgcatctgccacgcgcacccgtcgctg
tcggaagcgaccaaggaagccgcgctggcggtggacaagcgttcgcttaatttttaa
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