Massilia oculi: DIR46_22355
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Entry
DIR46_22355 CDS
T05448
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
mtim
Massilia oculi
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtim03009
]
DIR46_22355
Enzymes [BR:
mtim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DIR46_22355
Ribosome biogenesis [BR:
mtim03009
]
Prokaryotic type
rRNA helicases
DIR46_22355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AWL06904
UniProt:
A0A2S2DNH8
LinkDB
All DBs
Position
complement(4945723..4947132)
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AA seq
469 aa
AA seq
DB search
MQSDSFTSLSLEPRFLANLATLGYHHMTQVQAETLPSVLAGRDLIAQAKTGSGKTAAFGI
GILNKLNPAWFAVQGLVLCPTRELADQVAGELRRLARGVGNVKILTLTGGVSMRPQIASL
EHGAHIVVGTPGRIRDHLGRATLDLSKVQTLVLDEADRMTDMGFYDEIAGIVSATPVHRQ
TLLFSATYPDDIRFATAGFLRDPLEVTVEGQHSLEAIDQRFYEIGFEGREDAVGRLLKAH
RPVSALAFCNTKARCRELADSLQAQGFSALALYGELEQQERDEILVLFSNRSCSVLVATD
VAARGLDIADLDTVINVDVSRDPEVHVHRVGRTGRAGASGMAHTLVAPNEKKWVRLVEEY
QNQEAIWENLDALGEHQEPAAPAPMVTLCVAGGKKAKLRPGDLLGALTGDAGLTREQVGK
INIGEFNSYIALERTVAEAAVARLGQGDAPGPGFGAIKGRWFKMRFVEV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgactcgttcacctcgctgtccctcgaaccgcgtttcctcgccaacctggcc
accctcggctaccaccacatgacgcaagtgcaggccgagaccctgccgtcggtgctggcc
gggcgcgacctgatcgcccaggccaagaccggcagcggcaagaccgcggccttcggcatc
ggcatcctgaacaagctcaatccggcctggttcgcggtgcagggcctggtgctgtgcccg
acgcgcgaactggccgaccaggtcgcgggcgaattgcggcgcctggcgcgcggcgtcggc
aacgtcaagatcctgaccctgaccggcggcgtctcgatgcgtccgcagatcgcttcgctc
gagcatggcgcccacatcgtggtcggcaccccgggccgcatccgcgaccacctgggccgc
gccacgctcgacctgtcgaaggtgcagaccctggtgctcgacgaagccgaccgcatgacc
gacatgggtttctatgacgagatcgcgggcatcgtctcggccacgccggtccatcgccag
accctgctgttctcggcgacctacccggacgatatccgcttcgccaccgccggcttcctg
cgcgacccgctggaagtgacggtcgagggccagcacagcctggaggcgatcgaccagcgc
ttctacgagatcggcttcgaaggccgcgaggacgcagtgggccgcctgctcaaggcgcat
cgcccggtgtcggccctcgccttctgcaataccaaggcgcgctgccgtgaactcgccgac
agcctgcaggcgcaaggcttctcggcgctggcgctgtacggcgaactggaacagcaggag
cgcgacgagatcctggtgctgttcagtaaccgcagctgctcggtgctggtggccaccgac
gtcgccgcgcgcggcctcgacatcgccgacctcgacaccgtgatcaacgtcgacgtctcg
cgcgaccccgaggtccacgtgcaccgcgtcggccgcaccggccgcgccggcgcgagcggc
atggcgcataccctggtggcgccgaacgaaaagaaatgggtgcgcctggtcgaggaatac
cagaaccaggaagcgatctgggaaaacctcgacgcgctgggcgagcaccaggaaccggcc
gcgccggcgccgatggtgaccctgtgcgtggccggcggcaagaaggccaagctgcgtccg
ggcgacctgctgggcgcactgaccggcgacgccggcctgacccgcgaacaggtcggcaag
atcaatattggcgagttcaacagctatatcgcgctggagcggaccgtggccgaggccgcg
gtcgcgcgcctggggcaaggcgatgcgccgggaccgggcttcggcgccatcaagggccgc
tggttcaagatgcgcttcgtggaagtctga
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