Massilia oculi: DIR46_22480
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Entry
DIR46_22480 CDS
T05448
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mtim
Massilia oculi
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtim03400
]
DIR46_22480
DNA repair and recombination proteins [BR:
mtim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DIR46_22480
Archaeal homologous recombinant proteins
DIR46_22480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AWL06924
UniProt:
A0A2S2DNJ6
LinkDB
All DBs
Position
complement(4982072..4983343)
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AA seq
423 aa
AA seq
DB search
MRLLHTSDWHLGQTLHNHDRTYEHQCFLDWLADTLVEERIDVLLIAGDIFDTANPSSSAQ
RQLYRFLQQARTRAPHLQVVVIAGNHDSPGRLEAPTPLLEAHGTIVVGNVPRRGDGEIDL
ERLLVPLSDHDGNTAAWCLAVPFLRPGDLPRLRAAEGGQAADDSVRDPYEHGTALLYRQA
HALARERAAEGQPIVAMGHCHMARSQPSEDSERRIVIGGSEALPVGMFDAGIAYAALGHL
HLAQRVGGLEHVRYCGSPLPLSFSEVGYRHQVLRIDLDGANPAVVTPLYVPRPVQLLRVP
ALPAPPEEALAALEALALDADLPQQAWPYLEVRVLLDGPEPGLRARVEAILAGKPVRLAK
IEPTRKLVAASSETEALSLDQLAQLQPDDIFRRLWRQKYGDEAPPDQIDAFAELFHAVGG
DAP
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgctgcacacctccgactggcacctcggccagaccctgcacaatcacgaccgg
acctacgaacaccagtgcttcctcgactggctggccgacacgctggtcgaggagcgcatc
gacgtgctcctgatcgcgggcgacatcttcgacaccgccaacccgtcctcgagcgcccag
cgccagctgtaccgcttcctgcagcaggcgcgcacccgcgcgccgcacctgcaggtggtg
gtcatcgccggcaaccacgattcgccgggccggctggaagcgccgacgccgctgctggaa
gcccacggcacgatcgtggtcggcaacgtcccgcgccgcggcgacggcgagatcgacctg
gagcgcctgctggtgccgctctcggaccatgacggcaacacggcggcctggtgcctggcc
gtgcccttcctgcgtccgggcgacctgccgcgcctgcgcgccgccgaaggcgggcaagcg
gctgacgacagcgtgcgcgacccctacgagcacggcaccgccctgctctaccgccaggcg
catgcgctggcgcgcgaacgggcggccgagggccagcccatcgtcgccatgggccactgc
catatggccaggagccagccgtccgaggactccgagcgccgcatcgtgatcggcggcagc
gaagccctgccggtcggcatgttcgacgccggcatcgcctatgcggcccttggccacctg
cacctggcccagcgcgtcggcggcctcgaacacgtgcgctactgcggcagcccgctgccg
ctgtcgttctccgaagtcggctaccggcaccaggtgctgcgcatcgatctcgatggcgcc
aatcccgccgtagtcacacctttatatgtaccgcgtccggtgcaactgctgcgcgtgccg
gccctgccggcgccaccggaagaggcgctggcggcgctggaagcattggcgctggacgcg
gatctgccgcagcaggcctggccctacctggaggtgcgggtgctgctggacgggcccgag
ccgggtctgcgcgcccgcgtcgaggccatcctggccggcaagccggtgcggctggccaag
atcgagccgacccgcaagctggtcgcggcgtcgagcgagaccgaagccctgagcctggac
cagctggcgcagctgcagccggacgacatcttccgccgcctgtggcggcaaaagtatggc
gacgaggcgccgccggaccagatcgacgcgttcgccgagctgttccacgccgtgggagga
gacgcgccatga
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