Massilia oculi: DIR46_23760
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Entry
DIR46_23760 CDS
T05448
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mtim
Massilia oculi
Pathway
mtim03420
Nucleotide excision repair
mtim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DIR46_23760
03430 Mismatch repair
DIR46_23760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtim03400
]
DIR46_23760
Enzymes [BR:
mtim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DIR46_23760
DNA repair and recombination proteins [BR:
mtim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DIR46_23760
MMR (mismatch excision repair)
Other MMR factors
DIR46_23760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH_5
AAA_12
AAA_11
NACHT
ResIII
Motif
Other DBs
NCBI-ProteinID:
AWL07144
UniProt:
A0A2S2DP51
LinkDB
All DBs
Position
5279266..5281359
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AA seq
697 aa
AA seq
DB search
MSAVADPIITSSTDDPFASLNPEQRAAVEHDVGLDAPRPLLVVAGAGSGKTNTLAHRVAR
LIQAGADPQRILLLTFSRRAATEMTQRAGGVLHRLFGLKGSQAPVTLPWAGTFHSIGARL
LREFAGRIGLDDQFTIHDRGDSEDLMGMVRHEIGLSQLEKRFPLKGTCLSIYSRVVNGRE
PLDGVLQAFFPWCSEWEAQLKTLFGAYVDAKQEQNVLDYDDLLLFWAEMAADPVLGAELG
ALFDHVLVDEYQDTNRLQAAIVSGMKPDGRGVMVVGDDAQSIYGFRGATVRNILDFADQF
SQPAQLITLARNYRSTQPILDASNAVIGAALERHAKTLWTDKASTIKPQLVLIPDEAEQA
RWVCNRILEQRESGMALKSQAVLFRAASHSAALELELMRRNIPFVKFGGLKFLEAAHIKD
VLAVLRFAQNPSGRLAGFRALQLIPGIGQATATRLVEAAGTSVDAAAALEAFPVPARCRT
DWQAFCDLYRRLRTPGLRWPMDLELARAWYQPQLERLHDDAQVRAADLDQLVALSGGYGN
RESFLAEITLDPPEATSDRAGAPLLDEDYVILSTIHSSKGQEWNSVHVLNVVDGCIPSDM
ATGSQEDIEEERRLLYVAMTRARENLHLVVPNRFFIKQQSSMGDRHVYAARTRFITPVML
KHFEECAWLSADKRELRTPMPDSIRMMVRDRARNAWK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgtcgccgatccgatcatcacctcgtctaccgacgacccgttcgccagcctg
aaccccgagcagcgggcggcggtcgagcacgacgtcgggctcgacgcgccgcgtcccttg
ctggtggtggccggcgccggttccggcaagaccaatacgctggcgcaccgggtggcgcgc
ctgatccaggcgggcgccgatccgcagcgcattctgctgctgacgttttcgcgccgcgcc
gccaccgaaatgacccagcgcgccggcggcgtgctgcaccggttgttcgggctcaaggga
agccaggcgccggtcacgctgccctgggccggcaccttccacagcatcggcgcgcgcctg
ctgcgcgagtttgccgggcgcatcgggctggacgatcagttcacgatccacgaccgcggc
gactccgaagacctgatgggcatggtgcgccacgagatcggcctgagccagctcgagaaa
cgcttcccgctgaaaggcacctgcctgtcgatctattcgcgggtggtcaacggccgcgag
ccgctcgacggggtgctgcaggccttcttcccctggtgcagcgagtgggaagcccagctc
aagacgctgttcggcgcctatgtcgacgccaagcaggagcagaatgtgctcgactatgac
gacctgctgctgttctgggccgagatggcggccgacccggtgctgggggccgagctcggc
gcgctgttcgatcacgtgctggtcgacgaataccaggacaccaaccgcctgcaggcggcc
atcgtcagcggcatgaagcccgacggccgcggcgtgatggtggtgggcgacgatgcgcag
tcgatctatggctttcgcggcgcgaccgtgcgcaacatcctcgacttcgccgatcagttc
tcgcagccggcgcagctgatcaccttggcccgcaactatcggtccacgcagccgatcctg
gatgcgtcgaatgccgtgatcggcgccgcgctcgagcgccacgccaagaccctgtggacc
gacaaggcttcaaccatcaagccgcagctggtcctgattcccgacgaagccgagcaggcg
cgctgggtctgcaaccgcatcctcgaacagcgcgaaagcgggatggctctgaagtcgcag
gcggtgctgtttcgcgccgccagccacagcgccgcgctcgagctcgagctcatgcgccgc
aacatccccttcgtcaagttcggcggcctgaaattcctggaagcggcccacatcaaggac
gtgctggccgtgctccgtttcgcccagaacccgagcggacgcctggcgggtttccgcgcg
ctgcagctgattcccggcatcggccaggcgaccgccacccgcctggtcgaggccgccggc
acgagcgtcgacgcggcggcggccctggaggcgtttccggtgccggcccgctgcaggacc
gactggcaggcgttctgcgacctgtaccggcgcctgcgtacacccggcctgcgctggccg
atggacctcgagctggcgcgcgcgtggtaccagccgcagctcgagcgcctgcacgacgat
gcgcaggtgcgcgcggccgacctcgaccagttggtggcgctgtccggcggctatggcaac
cgcgagagcttcctggccgagatcacgctcgacccgcccgaagccaccagcgaccgcgcc
ggcgcgccgctgctcgacgaagactacgtgatcctgtccaccatccactcgagcaagggg
caagaatggaattcggtgcacgttttaaatgtcgtcgacggctgcattccgtcggacatg
gcgaccggcagccaggaggacatcgaggaagagcggcgcctgctctacgtcgccatgaca
cgcgcgcgtgaaaacctgcacctggtggtgccgaaccgcttcttcatcaagcagcagtcg
agcatgggagaccgccacgtgtatgcggcgcgcacgcgcttcatcaccccggtgatgctc
aagcatttcgaggagtgcgcctggctcagcgccgacaagcgcgagctgcgtacgccgatg
cccgacagcatccgcatgatggtacgcgaccgggcccggaacgcgtggaaatga
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