Massilia oculi: DIR46_23790
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Entry
DIR46_23790 CDS
T05448
Name
(GenBank) hypothetical protein
KO
K18304
LuxR family transcriptional regulator, quorum-sensing system regulator LasR
Organism
mtim
Massilia oculi
Pathway
mtim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DIR46_23790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtim03000
]
DIR46_23790
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
mtim01504
]
DIR46_23790
Transcription factors [BR:
mtim03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
DIR46_23790
Antimicrobial resistance genes [BR:
mtim01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
DIR46_23790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_28
HTH_23
YcaO
HTH_TSHZ3
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AWL07150
UniProt:
A0A2S2DP47
LinkDB
All DBs
Position
5290901..5291587
Genome browser
AA seq
228 aa
AA seq
DB search
MERVLVQHCAGLGFDQVLFGVVNSRHTRFESAFLRSNYSANWRDRYDRNGFAYVDPTVAH
CLSSTTPIVWEPGTFASSPQQAELYEEASAHGIRTGATLPIHGPQGEFGVISFASDARPD
VAAQRAMNEALPMLSLVRDYAFASSGRFREEAARPEEAPRLTRRELEVLQWVMAGKSSWE
VARITGCSEATVNFHLANVRQKFDVNTRQQAVVKAIALGLITPEDHHR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
ctggagcgcgtccttgttcaacattgcgcggggctgggcttcgaccaggtgctgtttggc
gtcgtcaactcgcgccatacccgcttcgagtcggccttcttgcgcagtaattattccgcc
aactggcgcgatcgctacgaccgcaacggcttcgcctacgtcgatccgaccgtcgcccat
tgcctgtcgagtacgacgcccatcgtgtgggagccgggtacctttgcttccagcccccag
caggccgagctgtacgaggaagcgagcgcccacggcattcgcactggtgcgaccctgccg
atccacgggccgcagggcgaattcggggtgatcagtttcgcgtccgacgcccggccggat
gtcgctgcacagcgcgcgatgaacgaggcgctgccgatgctgtcgctggtgcgcgactat
gcgttcgcgtcttccgggcgtttccgcgaggaggcggcgcggccggaggaggcgccgcgc
ctgacgcgccgcgagctggaagtgttgcagtgggtgatggcgggcaagtcgtcatgggaa
gtcgcgcgcatcaccggctgttccgaagccaccgtcaattttcacctggcgaatgtgcgt
caaaaatttgacgtcaacactcgccagcaggcggtggtcaaggccatcgccctggggctc
atcacccctgaagatcaccatcgctga
DBGET
integrated database retrieval system
