Massilia oculi: DIR46_24110
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Entry
DIR46_24110 CDS
T05448
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
mtim
Massilia oculi
Pathway
mtim00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DIR46_24110
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mtim01007
]
DIR46_24110
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtim03016
]
DIR46_24110
Enzymes [BR:
mtim01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
DIR46_24110
Amino acid related enzymes [BR:
mtim01007
]
Aminoacyl-tRNA synthetase
Class II (U)
DIR46_24110
Transfer RNA biogenesis [BR:
mtim03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DIR46_24110
Prokaryotic type
DIR46_24110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
AWL07205
UniProt:
A0A2S2DPA3
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All DBs
Position
5361589..5364015
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AA seq
808 aa
AA seq
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MQFSENWLRSIVDPKMSSDELSHLLTMSGLEVEEVEAVAPPFSNVVVAKVKEVAKHPNAD
RLNVCQVDAGTGTLLNIVCGAPNVRAGMKAICAKSGALLPPGADGKPFEIKTGKLRGVES
QGMMCSAKELGISEESNGLMELPEDAPVGQNIRDYLGLNDLKFTIKLTPNKADCLSVLGV
AREVSALTGSPLSLAPTRAVPVSSDEILPVKVSAPDLCGRFAGRVIRGLNARATTPEWMK
RRLERSGQRSVSALVDISNYVMLEVGRPSHVFDLARIHGSLDVRWGKKGESLKLLNGNTV
ELDEWVGVIADDKEIESLAGIMGGDSTAVSLDTTDIYLEAAFWWPNAIQGRARRYNFSTD
AAHRFERGVDYATIPDHIERITALIVEICGTAETRVGPVDDQVVNLPQRQPVMLRTARAQ
QVIGVPLSDELIADIFTRLGLEFTRAEGSFLVTAPSYRFDIEIEEDLIEEVARVYGFENI
PANPPVAPSAMLIAPENTRSLFAIRHQLADLGYQEVVNMSFVESAWEADFAGNLEPIRLR
NPIASQLSVMRSSLIGSLVANVRYNINRKAGRVRAFEVGAVFKRNADVQDGALAVAGIDQ
PKRVAAIAYGPAVDEQWGVPTRAVDFFDVKADLEALFAPRQLRFAKAEHPALHPGRCATV
ELDGKQIGLVGELHPRWLQKYDLPQAPVLFEVDAAALCERVVPSHTEISKFPGATRDLAL
VVKQDVPAQRVIDAFHAEIASNPAGKIVQAVVLFDEYRGKGLETDEKSLAFRFSLQDTQS
TLQDEAVDAIMAAVAESASTKLNARLRA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctcggaaaactggctccgttccatcgtcgatccgaagatgagttcggatgag
ctgtcccatctgctgaccatgtccggcctcgaagtggaagaggtcgaggcggtcgcgccg
ccgttctcgaacgtggtggtggccaaagtcaaggaagtggcgaagcacccgaacgccgac
cgcctgaacgtgtgtcaggtcgatgccggtaccggcaccctgctgaatatcgtgtgcggc
gcgccgaacgtgcgcgccggcatgaaggcgatttgcgccaagtccggcgcgctgctgccg
ccgggcgccgacggcaagccgttcgagatcaagaccggcaagctgcgcggcgtcgaatcg
cagggcatgatgtgctcggcgaaagagctgggcatctcggaagagagtaatggcttgatg
gaactgccggaagacgcgccggtcggccagaacatccgcgactacctgggcctgaacgac
ctgaaattcaccatcaagctgaccccgaacaaggccgactgcctgtcggtgctgggcgtg
gcgcgcgaagtgtcggccctgactggctctcccctgagcctggcgccgacgcgcgccgta
ccggtgagcagcgacgaaatcctgccggtcaaggtgtcggcgcccgacctgtgcggccgt
ttcgccggccgcgtgatccgcggcctgaacgcccgcgcgaccacgccggaatggatgaag
cgccgcctggagcgcagcggccagcgctcggtgtcggccctggtcgacatttccaactat
gtgatgctggaagtcggccgtccgtcgcacgtgttcgacctggccaggatccacggttcg
ctggacgtccgctggggcaagaagggcgagtcgctcaagctgctgaacggcaataccgtc
gagctcgacgagtgggtgggcgtgatcgccgacgacaaggagatcgaatcgctggccggc
atcatgggcggcgattccaccgcagtctcgctggacacgaccgacatctatcttgaagcg
gcgttctggtggccgaatgcgatccagggccgtgcccgccgctacaatttctcgaccgat
gcggcgcaccgcttcgagcgcggcgtcgactacgcgaccattcccgaccatatcgagcgc
attaccgcgctgatcgtcgagatctgcggcaccgccgagaccagggtgggcccggtcgac
gaccaggtcgtcaacctgccgcagcgccagcccgtgatgctgcgcaccgcgcgcgcgcaa
caggtcatcggcgtgcctttgagcgacgagctgatcgcggacatcttcacccgcctggga
ctggaattcacgcgtgccgagggcagtttcctggtgacggcgccgtcgtaccgcttcgac
atcgagatcgaggaagacctgatcgaagaagtcgcgcgcgtctatggcttcgagaacatc
ccggccaatccgccggtggcgccgagcgccatgctgatcgcgccggaaaacacccgttcg
ctgttcgcgatccgtcatcaactggccgacctgggttaccaggaagtggtcaatatgagc
ttcgtcgagagcgcctgggaggccgatttcgccggcaacctcgagccgatccgcctgcgg
aacccgatcgccagccagctctccgtgatgcgttcgagcctgatcggcagcctggtcgcc
aatgtgcgctacaacatcaaccgcaaggccggccgcgtgcgcgccttcgaagtcggcgcc
gtgttcaagcgcaatgccgacgtccaggacggtgcgctggcagtggccggcattgatcag
cccaagcgcgtggccgcgatcgcctacggtcctgccgtggacgagcagtggggcgtgccg
acccgcgcggtcgatttcttcgacgtgaaagccgacctggaggcgctgttcgccccgcgc
cagctgcgtttcgccaaggccgagcacccggcgctgcacccgggccgttgcgccacggtc
gagctggacggcaagcagatcggcctggtcggcgagctgcatccgcgctggctgcagaaa
tacgacctgccgcaagcgccggtactgttcgaagtcgatgccgccgccctgtgcgagcgc
gtggtcccgagccataccgagatttcgaagttcccgggcgccacgcgcgacctggcgctg
gtggtgaaacaggatgtcccggcccagcgcgtgatcgatgcattccatgccgaaatcgcc
tccaatcctgcaggaaagatcgtgcaagccgttgttttgtttgatgaatatcgcggcaag
ggcctggagacggatgaaaaaagtcttgctttccgctttagcttgcaagatactcaatcg
acgctgcaggacgaagcggtcgacgccatcatggcggccgtcgccgaatccgcttcgacg
aaactgaacgcgcggctgcgcgcctga
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