Massilia oculi: DIR46_24760
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Entry
DIR46_24760 CDS
T05448
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
mtim
Massilia oculi
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtim03009
]
DIR46_24760
Ribosome biogenesis [BR:
mtim03009
]
Prokaryotic type
ribosomal protein modification factors
DIR46_24760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
RRM_8
Motif
Other DBs
NCBI-ProteinID:
AWL07319
UniProt:
A0A2S2DQL4
LinkDB
All DBs
Position
5530529..5532727
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AA seq
732 aa
AA seq
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MEIKVNFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCN
TRNIPTENIRLSQNNIVDPENRYQQIFKIQVELPADISEKDRQGILRSIERCTVKKVVQA
GPEFVIEEVANLDADAQALLTLQPDSASRTYIPGKDLPLEQTIANMSGMLASWGIKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGSTKESALASALGEYIERLNNNHFYAGVFWGED
IANADFVHYPNERWFKPGPDDALPDGILDEYSLSFYDPDGELRGSHLIDTNSGNVERGIV
ALPFVRQSDGEVVYFPSNLVENLYASNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEM
ALPDVPQEVLAKYPGIVAGIKGLEEQGFPVLVKDASLGGQYPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPRPTFASEAVTEPYNFVEHFIDSSGVVSWRF
FSAKSDVDFVEWDFTAQGANANAEEAATLLSILEDMGKEVYTAVYDQLGAVACRILVPDY
SEVYPVEDLIWDNTNKSLLFRSDILNLHRLDEDSLEALLERLENNELDEYSDIASLIGIE
FDENTDWGQLTVLELRLLINLALKRYEDAHELVGAFLQYNDNTVERGLFYQAMNVVLEVV
LDDEMELDDYVVNFRRMFGDARMDAVLGSVDGSVRFYGLTPTSMQLEGLDRHHRLIDSYR
KLHAARAKAAAK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaagtcaacttcctcgacaagcttcgcctggaagccaagttcgacgatttc
accgtcatcgccgaccagcccatccgctataaaggcgatggctcggcgccaggcccgttc
gattacttcctggcctcgtccgccctgtgcgcggcgtatttcgtgaagttgtactgcaat
acccggaatatcccgaccgagaatatccgcctgtcgcaaaacaatatcgtcgacccggaa
aaccgctaccagcaaattttcaagattcaggtcgagctgccggcggacatttccgaaaaa
gaccgccagggcatcctgcgctcgatcgagcgctgcacggtcaagaaggtcgtccaggcc
ggccccgaattcgtgatcgaggaagtggccaacctggacgccgatgcccaggccttgctg
accctgcagcccgattcggcatcgcgcacctatatcccgggcaaggacctgccgctggag
cagaccatcgccaatatgtcggggatgctggccagctggggcatcaagatcgagatcgcg
tcgtggcgcaatatcgtccccaatgtctggtcgctgcatatccgcgatgcgcattcgccg
atgtgcttcaccaacggcaaaggctcgaccaaggaaagcgctttggcctcggcgctgggc
gaatacatcgaacgcctgaacaacaatcacttctacgccggggtgttctggggcgaggac
atcgccaacgccgacttcgtgcattatccgaacgagcgctggttcaagcccggcccggac
gatgcgctgccggacggcatcctcgacgagtacagcctgtcgttctacgatcccgatggc
gaattgcgcggctcgcacctgatcgacaccaattcgggcaatgtggaacgcggcatcgtg
gcgctgcccttcgtgcgtcagtcggacggcgaggtcgtgtacttcccgtccaacctggtc
gaaaacctgtatgccagtaacggcatgagcgccggtaacacgctggccgaagcgcaggtg
cagtgcctgtccgagatcttcgagcgcgccgtcaagcgcgagatcctggaaggcgagatg
gccttgcccgacgtgccgcaagaagtgctggcgaaatacccgggtatcgtggccgggatc
aagggcctggaagagcagggcttcccggtgctggtcaaggatgcctcgctgggcggccaa
tacccggtgatgtgcgtgaccctgatgaacccacgcaccggcggcgtgttcgcgtccttc
ggcgcccacccgagcttcgaggtggcgctggagcgcagcctgaccgaactgctgcagggc
cgcagcttcgaaggcctcaacgacctgccgcggccgaccttcgccagcgaagcggtgacc
gagccgtacaacttcgtcgagcacttcatcgattcgagcggcgtcgtatcgtggcgcttc
ttcagcgccaaatcggacgtcgatttcgtcgaatgggacttcacggcgcagggcgccaat
gccaatgccgaagaagccgcgaccctgctgtccatcctcgaagacatgggcaaggaagtc
tacaccgccgtgtacgaccagctgggcgcggtggcctgccgcatcctggtgcccgattat
tccgaggtgtatccggtcgaagacctgatctgggataacacgaataaatcgctgctgttc
cgttcggacatcctcaatctgcaccgcctggacgaggacagcctggaagcgctgctggaa
cgcctggaaaacaatgagctggacgagtattccgacatcgccagcctgatcggcatcgag
ttcgacgagaacaccgactggggccagctgacggtgctcgagctgcgcctgctgatcaac
ctcgcgctcaagcgctacgaggatgcgcacgaactggtcggcgccttcctgcagtacaac
gacaacaccgtcgagcgcggcctgttctaccaggccatgaacgtggtgctcgaggtggtg
ctggacgacgagatggaactggacgactatgtcgtcaacttccgccgcatgttcggcgac
gcgcggatggacgcagtgctgggctcggtcgacggcagcgtgcgcttctacggcctgacg
ccgaccagcatgcagctggaaggcctggaccgtcaccaccgcctgatcgacagctaccgc
aagctgcacgcggcgcgcgccaaggcggccgcgaagtaa
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