KEGG   Massilia oculi: DIR46_25620
Entry
DIR46_25620       CDS       T05448                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mtim  Massilia oculi
Pathway
mtim00010  Glycolysis / Gluconeogenesis
mtim00020  Citrate cycle (TCA cycle)
mtim00260  Glycine, serine and threonine metabolism
mtim00280  Valine, leucine and isoleucine degradation
mtim00310  Lysine degradation
mtim00380  Tryptophan metabolism
mtim00620  Pyruvate metabolism
mtim00630  Glyoxylate and dicarboxylate metabolism
mtim00640  Propanoate metabolism
mtim00670  One carbon pool by folate
mtim00785  Lipoic acid metabolism
mtim01100  Metabolic pathways
mtim01110  Biosynthesis of secondary metabolites
mtim01120  Microbial metabolism in diverse environments
mtim01200  Carbon metabolism
mtim01210  2-Oxocarboxylic acid metabolism
mtim01240  Biosynthesis of cofactors
Module
mtim_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mtim_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mtim_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
mtim_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mtim_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mtim00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DIR46_25620 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DIR46_25620 (lpdA)
   00620 Pyruvate metabolism
    DIR46_25620 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DIR46_25620 (lpdA)
   00640 Propanoate metabolism
    DIR46_25620 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DIR46_25620 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DIR46_25620 (lpdA)
   00310 Lysine degradation
    DIR46_25620 (lpdA)
   00380 Tryptophan metabolism
    DIR46_25620 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DIR46_25620 (lpdA)
   00670 One carbon pool by folate
    DIR46_25620 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mtim04147]
    DIR46_25620 (lpdA)
Enzymes [BR:mtim01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DIR46_25620 (lpdA)
Exosome [BR:mtim04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DIR46_25620 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox NAD_binding_8 Pyr_redox_3 UDPG_MGDP_dh_N FAD_binding_3 GIDA DAO Lys_Orn_oxgnase FAD_binding_2 3HCDH_N
Other DBs
NCBI-ProteinID: AWL07468
UniProt: A0A2S2DQ95
LinkDB
Position
complement(5732001..5733395)
AA seq 464 aa
METINTTLLIVGGGPGGYVAGIRAGQLGIPAIVVEGANPGGTCLNIGCIPSKALIYAADE
YHKAATYAAQESPLGISVESPRIDLERTVAWKDGIVKRLTGGVGLLLKKQGVRVVHGWAR
VLDGKTVEVEADGQETVRIRCEHLLLASGSQAVELPFMPFGGPVISSTEALSQDSVPRRL
VVVGAGYIGLELGTAYRKLGSQVTVVEAAERILPAYDAELVKPVAKSLERLGVELRLATS
VLGMEGERVKVRDASGVEAYLEADKVLVAVGRKPATTGWGLENLMLDMAGRAIRVDEQCR
TSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIIAGKRRWFQPAAIPAVCYTDPEIVVAGM
SPSEAQAAGIDAIQASFPFSANGRAMTIEGTDGFVRVVARKDNHLILGWQAVGVGVSELA
AGFTQSIELGAQLEDVARTIHAHPTLGEAVQEAALRALGHALHI
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggagacaatcaatacgactctgctcatcgtcggcggcggcccgggcggctacgtggcc
ggcatccgtgccggccagctgggcatcccggccatcgtggtcgagggcgcgaacccgggc
ggcacctgcctgaacatcggctgcatcccctccaaggcgctgatctacgcggccgacgag
taccacaaggccgccacctacgcggcccaggaatcgccgctcggcatcagcgtcgagtcg
ccgaggatcgacctggagcgcaccgtggcctggaaggacggcatcgtcaagcgcctcacc
ggcggcgtcgggctgctcctcaagaaacagggcgtgcgcgtagtgcacggctgggccagg
gtactggacgggaagaccgtcgaagtcgaggccgacggccaggaaacggtgcgcatccgc
tgcgaacacctgctgctggccagcggctcgcaggccgtcgagctgccattcatgccgttc
ggcggcccggtgatctcttccaccgaggccttgtcccaggacagcgtgccgcggcgcctg
gtggtggttggcgccggctatatcggcctggagctgggcacggcctaccgcaagctgggc
agccaggtgacggtggtggaagcggcggagcgcatcctgccggcctatgacgccgaactg
gtcaagccggtagcgaaatcgctcgagcggctcggcgtcgaactgcgcctggcgacgtcg
gtgttgggcatggaaggtgaacgggtaaaggtgcgcgacgcttccggcgtcgaggcctac
ctggaagccgacaaggtactggtggccgtcggccgcaagccggcaaccaccggctggggc
ctggaaaacctgatgctcgacatggcgggacgcgcgatcagggtcgacgagcaatgccgc
acgtcgatgcgcaatgtgtgggcgatcggcgacctcaccggcgagccgatgctggcccac
cgcgccatggcccagggcgagatggtggccgagatcatcgccggcaagcgccgctggttc
cagccggcggcgattccggcggtgtgctacaccgatcccgagatcgtcgtggccggcatg
tcgccatccgaggcgcaagccgccggtatcgacgccatccaggccagcttcccgttcagc
gccaacggccgcgcgatgacgatcgagggtacggatggcttcgtgcgcgtggtcgcacgc
aaggacaaccacctgatcctcggctggcaggcggtcggtgtcggggtgtcggaactggcg
gcaggcttcacccagtcgatcgagctgggcgcccagctggaagacgtcgcccgcacgatc
cacgcccatccgacgctgggcgaagcggtgcaggaagccgcgctgcgcgcgctcggccac
gccctgcatatctga

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