Massilia oculi: DIR46_25620
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Entry
DIR46_25620 CDS
T05448
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mtim
Massilia oculi
Pathway
mtim00010
Glycolysis / Gluconeogenesis
mtim00020
Citrate cycle (TCA cycle)
mtim00260
Glycine, serine and threonine metabolism
mtim00280
Valine, leucine and isoleucine degradation
mtim00310
Lysine degradation
mtim00380
Tryptophan metabolism
mtim00620
Pyruvate metabolism
mtim00630
Glyoxylate and dicarboxylate metabolism
mtim00640
Propanoate metabolism
mtim00670
One carbon pool by folate
mtim00785
Lipoic acid metabolism
mtim01100
Metabolic pathways
mtim01110
Biosynthesis of secondary metabolites
mtim01120
Microbial metabolism in diverse environments
mtim01200
Carbon metabolism
mtim01210
2-Oxocarboxylic acid metabolism
mtim01240
Biosynthesis of cofactors
Module
mtim_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mtim_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mtim_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
mtim_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mtim_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DIR46_25620 (lpdA)
00020 Citrate cycle (TCA cycle)
DIR46_25620 (lpdA)
00620 Pyruvate metabolism
DIR46_25620 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DIR46_25620 (lpdA)
00640 Propanoate metabolism
DIR46_25620 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DIR46_25620 (lpdA)
00280 Valine, leucine and isoleucine degradation
DIR46_25620 (lpdA)
00310 Lysine degradation
DIR46_25620 (lpdA)
00380 Tryptophan metabolism
DIR46_25620 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DIR46_25620 (lpdA)
00670 One carbon pool by folate
DIR46_25620 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtim04147
]
DIR46_25620 (lpdA)
Enzymes [BR:
mtim01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DIR46_25620 (lpdA)
Exosome [BR:
mtim04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DIR46_25620 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
NAD_binding_8
Pyr_redox_3
UDPG_MGDP_dh_N
FAD_binding_3
GIDA
DAO
Lys_Orn_oxgnase
FAD_binding_2
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AWL07468
UniProt:
A0A2S2DQ95
LinkDB
All DBs
Position
complement(5732001..5733395)
Genome browser
AA seq
464 aa
AA seq
DB search
METINTTLLIVGGGPGGYVAGIRAGQLGIPAIVVEGANPGGTCLNIGCIPSKALIYAADE
YHKAATYAAQESPLGISVESPRIDLERTVAWKDGIVKRLTGGVGLLLKKQGVRVVHGWAR
VLDGKTVEVEADGQETVRIRCEHLLLASGSQAVELPFMPFGGPVISSTEALSQDSVPRRL
VVVGAGYIGLELGTAYRKLGSQVTVVEAAERILPAYDAELVKPVAKSLERLGVELRLATS
VLGMEGERVKVRDASGVEAYLEADKVLVAVGRKPATTGWGLENLMLDMAGRAIRVDEQCR
TSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIIAGKRRWFQPAAIPAVCYTDPEIVVAGM
SPSEAQAAGIDAIQASFPFSANGRAMTIEGTDGFVRVVARKDNHLILGWQAVGVGVSELA
AGFTQSIELGAQLEDVARTIHAHPTLGEAVQEAALRALGHALHI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggagacaatcaatacgactctgctcatcgtcggcggcggcccgggcggctacgtggcc
ggcatccgtgccggccagctgggcatcccggccatcgtggtcgagggcgcgaacccgggc
ggcacctgcctgaacatcggctgcatcccctccaaggcgctgatctacgcggccgacgag
taccacaaggccgccacctacgcggcccaggaatcgccgctcggcatcagcgtcgagtcg
ccgaggatcgacctggagcgcaccgtggcctggaaggacggcatcgtcaagcgcctcacc
ggcggcgtcgggctgctcctcaagaaacagggcgtgcgcgtagtgcacggctgggccagg
gtactggacgggaagaccgtcgaagtcgaggccgacggccaggaaacggtgcgcatccgc
tgcgaacacctgctgctggccagcggctcgcaggccgtcgagctgccattcatgccgttc
ggcggcccggtgatctcttccaccgaggccttgtcccaggacagcgtgccgcggcgcctg
gtggtggttggcgccggctatatcggcctggagctgggcacggcctaccgcaagctgggc
agccaggtgacggtggtggaagcggcggagcgcatcctgccggcctatgacgccgaactg
gtcaagccggtagcgaaatcgctcgagcggctcggcgtcgaactgcgcctggcgacgtcg
gtgttgggcatggaaggtgaacgggtaaaggtgcgcgacgcttccggcgtcgaggcctac
ctggaagccgacaaggtactggtggccgtcggccgcaagccggcaaccaccggctggggc
ctggaaaacctgatgctcgacatggcgggacgcgcgatcagggtcgacgagcaatgccgc
acgtcgatgcgcaatgtgtgggcgatcggcgacctcaccggcgagccgatgctggcccac
cgcgccatggcccagggcgagatggtggccgagatcatcgccggcaagcgccgctggttc
cagccggcggcgattccggcggtgtgctacaccgatcccgagatcgtcgtggccggcatg
tcgccatccgaggcgcaagccgccggtatcgacgccatccaggccagcttcccgttcagc
gccaacggccgcgcgatgacgatcgagggtacggatggcttcgtgcgcgtggtcgcacgc
aaggacaaccacctgatcctcggctggcaggcggtcggtgtcggggtgtcggaactggcg
gcaggcttcacccagtcgatcgagctgggcgcccagctggaagacgtcgcccgcacgatc
cacgcccatccgacgctgggcgaagcggtgcaggaagccgcgctgcgcgcgctcggccac
gccctgcatatctga
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