Mycobacterium tuberculosis CCDC5180: CCDC5180_2000
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Entry
CCDC5180_2000 CDS
T01992
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mtl
Mycobacterium tuberculosis CCDC5180
Pathway
mtl03030
DNA replication
mtl03430
Mismatch repair
mtl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCDC5180_2000
03430 Mismatch repair
CCDC5180_2000
03440 Homologous recombination
CCDC5180_2000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtl03032
]
CCDC5180_2000
03400 DNA repair and recombination proteins [BR:
mtl03400
]
CCDC5180_2000
Enzymes [BR:
mtl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCDC5180_2000
DNA replication proteins [BR:
mtl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCDC5180_2000
DNA repair and recombination proteins [BR:
mtl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCDC5180_2000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DUF7508
UVR
OHCU_decarbox
Motif
Other DBs
NCBI-ProteinID:
AEJ50837
LinkDB
All DBs
Position
2444912..2446825
Genome browser
AA seq
637 aa
AA seq
DB search
MGATGGTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRTTGNDATPPDAITE
IGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDAVLPMFFEFAGDS
VLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPSVRLAALARLFAV
ASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQRCKRVLAETLPH
RPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLASSIDHVECAHPLE
AGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHDRVVGPFRSRSKA
AETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQYAEAVLRAAALI
GGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLRALAALPELIAAK
PDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPTPAPLGGALVEEI
ALIARWLAEPGVRIVGVSNDAAGLASPVRSAGPWAAWAATARSAQLAGEQLSRGWQSDLP
TEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaaccggtgggactcagctgagtttcgccgacctggcacacgcccagggggca
gcctggaccccagccgacgagatgtccctgcgcgagaccaccttcgtcgtggtcgacctg
gaaaccacaggtgggcgcacgacgggtaacgacgcaacaccgccggacgcgatcaccgaa
atcggggcggtcaaggtatgcggcggcgcggtgctcggtgaattcgccaccctggtaaac
ccgcaacacagcattccgccccagatcgtgcggctcaccggtatcactacggcgatggtg
ggtaatgccccgacgatcgacgccgtcctgccgatgttcttcgagttcgccggcgactcg
gtgctcgtggcccacaacgctgggttcgatatcggattcctgcgcgccgccgcgaggcgg
tgcgatatcacctggccccaaccacaggtgttgtgcacgatgcggctggcccggcgggtg
ctgagccgagacgaagcccctagcgtgcgtctggccgcgctagcgcggctgttcgccgtc
gccagcaaccccacccaccgcgccctcgacgacgctcgcgccaccgtcgacgtgctgcac
gcactcatcgagcgagtgggcaaccagggcgtgcacacctatgccgagctgcgctcgtat
ctgcccaacgtgacccaggcgcagcgctgcaaacgggtactggcggaaacactgccgcac
cggccgggggtgtacctgttccgcggaccgtcgggcgaggtgctctatgtcggcaccgcg
gcggacttgcgccgccgggtaagccagtacttcaacggcaccgaccgccgcaagcggatg
acggagatggtcatgctggccagctcgatcgatcatgtcgaatgcgcgcaccccctggag
gccggtgtccgtgagctgcggatgctgtcgacgcatgccccgccgtataaccgcaggtcg
aagttcccataccggtggtggtgggtggcgctcaccgatgaagcatttccacgcctgtcg
gtcatccgggccccgcgacacgaccgcgtcgtcggcccgttccgatcccgctccaaggcc
gccgagacggcagcgctgctggcacgctgcacgggactgcgaacctgcaccactcggctg
acacgttccgcccggcacggacccgcctgccccgagctggaagtgtcggcctgcccggcc
gcccgcgacgtcacggccgcgcaatacgccgaggcggtactgcgcgcggcggccttgatc
ggcggattggacaacgccgcgctggccgcggccgttcaacaggtcactgagctcgccgag
cgccgtcgctatgagagcgctgcccgactgcgtgaccacctcgccaccgccatcgaggcg
ttgtggcatggccaacgattgcgagcactggccgcgctgcccgagttgatcgccgccaag
ccggacggccccagggagggcggctaccaactggccgtcattcgccacggccaactcgcc
gctgccggcagggcaccgcgcggggttcctccgatgcctgtggtcgacgccatccgccgc
ggcgctcaggcgatcctgcctacgccggcaccgctcggcggggcactggtggaggagatc
gcgctcatcgcccgctggctggccgagccgggagtgcgcatcgtcggggtctcgaacgac
gccgcagggttggcctccccagtgcgctcggccggcccgtgggcagcgtgggcggcaacg
gcgcgctcggcccagttggccggcgagcagctcagcagaggttggcagtcagatctgccg
accgaaccgcacccatcgcgcgagcaactgttcggccgcaccggtgtcgattgccgcact
ggcccgccgcaacccctcctcccaggccggcagccattcagcacggctggataa
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integrated database retrieval system
