Thermothelomyces thermophilus: MYCTH_107255
Help
Entry
MYCTH_107255 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03420
Nucleotide excision repair
mtm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MYCTH_107255
09124 Replication and repair
03420 Nucleotide excision repair
MYCTH_107255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtm04121
]
MYCTH_107255
03400 DNA repair and recombination proteins [BR:
mtm03400
]
MYCTH_107255
Ubiquitin system [BR:
mtm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
MYCTH_107255
DNA repair and recombination proteins [BR:
mtm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
MYCTH_107255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_RFWD3
NBCH_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
11511771
NCBI-ProteinID:
XP_003661092
JGI:
107255
UniProt:
G2QAF1
LinkDB
All DBs
Position
2:complement(join(410824..411080,411142..412109,412200..412483))
Genome browser
AA seq
502 aa
AA seq
DB search
MNLLLFERSSGRLGPDEFARIQATTLLRSFARAPHFRFDGGERDASVPVGRGNRAVASAA
DGSGSGGDAAAPRVSLWAHQAGVSALALERFDGRILVSGGSDATIKLWDLEQCPNPWRYY
TYRPVAVVSRAGSDSAAAGHRFGVTHLSFYPFDSAAFLSCSHDQTLKLWSTERASVSGSF
FLGSRVYTHAVSPIASHLLVACGTQHPAVRLVDLRSSAAVQSLVPPGQTGGSAGAVLSVS
WSPAYEHVLAAGSADGAVRIWDVRKSNGLVALLDQEDVVGLADGGTTSQLRPPRLAAKAH
AGAVNGLTWTDDGAYLVSAGHDRRIRVWDAATGANTLASFGPSIRNSQMGAVTMFVSPLG
LTAPGCELLFFPNETEILVMDLHEGSTVARLRGMGPAVASVGTHQGGERAIKNRVTSLAW
RGAGGSGGSSGVVMGGSNAAGGLLSGHLDGQIRGWLPELEGADDEGDDDDDGAADISAAK
TKKRKALDDAFRSLMGRQVTFS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcttctgtttgagcgatcgtcgggcaggctgggtccggacgagttcgccagg
atccaggcgacgacgctgctgcgttccttcgctcgtgctcctcactttcgcttcgacggc
ggcgaacgtgatgcaagcgttcccgtcggccgcggaaacagagccgtagcttcggcagct
gatggttctggctcgggcggcgatgctgctgccccgagggtttctctctgggcgcaccag
gccggtgtcagtgccctggctctggagcgcttcgatggccgcatactggtttctggcggc
tcggacgccactatcaagctctgggatctggaacagtgcccaaacccatggcggtattat
acctaccgccccgttgctgtggtctctcgtgctggcagcgactccgcggcagccgggcac
cgcttcggcgtcactcacctgtctttctacccgtttgacagtgccgcatttctctcctgc
tcgcatgaccagacgctcaagctgtggtccaccgagagggcatccgtgtccggttcgttc
ttcctcggctccagggtctacactcacgcagtttccccgatagcctcccatctgctggtc
gcatgcgggactcaacacccggccgtccgcctcgtcgatctgcgctcttccgccgcggtg
cagtcgctggttccgccgggccagaccggtggttctgccggcgccgtcctgtccgtgtcc
tggtccccggcgtacgagcacgtccttgctgccggctcggcggacggggcagtgcgcatc
tgggacgtgaggaagtccaatggcctggtcgcgctcctcgaccaagaggatgtcgtcggt
cttgccgacgggggcacgacgtcgcaactacgtcctcctcggctcgcagcaaaggcacat
gctggggccgtgaacggcctcacctggacggacgacggagcctacctcgtatccgctggc
cacgaccgccgcatacgcgtctgggacgcggcgaccggcgccaacacacttgccagcttt
gggccgagcatccgtaacagccagatgggcgccgtcaccatgtttgtctcgccccttggt
ctcacggcgccagggtgtgagctgttgttcttcccgaacgagaccgagatactggtcatg
gatctccacgaggggtctaccgtcgcaagattacgcggaatgggcccggctgtagcctct
gtcggtacacatcaggggggtgaaagggccatcaagaatcgtgtcacgagcctcgcatgg
agaggggccggggggagcggaggttcaagtggtgtggttatgggcggcagtaacgctgcc
ggtggcctactcagcgggcacttggatggtcaaatccggggttggctcccggaacttgag
ggtgcggacgacgaaggggatgatgacgacgacggcgcagcagatatctctgccgccaag
acgaagaagagaaaggctctggatgatgcctttcgaagtttgatgggcagacaagtcact
ttctcctag
DBGET
integrated database retrieval system
