Thermothelomyces thermophilus: MYCTH_107891
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Entry
MYCTH_107891 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03040
Spliceosome
mtm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCTH_107891
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MYCTH_107891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtm03041
]
MYCTH_107891
04121 Ubiquitin system [BR:
mtm04121
]
MYCTH_107891
03400 DNA repair and recombination proteins [BR:
mtm03400
]
MYCTH_107891
Enzymes [BR:
mtm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
MYCTH_107891
Spliceosome [BR:
mtm03041
]
Complex B
Other components
Prp19 complex
MYCTH_107891
Complex C
Prp19-CDC5 complex
MYCTH_107891
Ubiquitin system [BR:
mtm04121
]
Ubiquitin ligases (E3)
U-box type E3
MYCTH_107891
DNA repair and recombination proteins [BR:
mtm03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
MYCTH_107891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
PhzC-PhzF
Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_Gbeta
PEP5_VPS11_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
B-prop_COPA_B_2nd
eIF2A
WD40_RFWD3
WD40_like
Beta-prop_TEP1_2nd
Beta-prop_EML
zf-Nse
Beta-prop_Aladin
Beta-prop_ACSF4
gpW
Mcl1_mid
Motif
Other DBs
NCBI-GeneID:
11512594
NCBI-ProteinID:
XP_003662518
JGI:
107891
UniProt:
G2QC98
LinkDB
All DBs
Position
3:join(389325..390371,390763..390889,390946..390990,391055..391499,391556..392013,392105..392577)
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AA seq
864 aa
AA seq
DB search
MAGHDAPKLDFVTVDVFTDTRFVGNPLAVVFVPAALRDRIDQSTKQRIAREFNLSETVFL
HTLDNEPNRSVTTREIDIFTTEDELPFAGHPTIGSAYLVLKHLGWSHVDTLQTKAGPIRI
ESLQDQDQGRGQGRVRAAIPHAVHIHQQTLGGILESPSGPLASAAADAIRQGLSADADIR
AAELAAPVVSIVRGMTFVLVRLPSLEHLARVTPARRIDFGKVPELLDQGEWHDSFVSRYY
YVPRGQEADEGALADDGSRSWKIQTRMVELGFEDPATGSAACALASYLAVRNEAVRGARF
EITQGVEMGRRSDIVVDTVALKDKESGEVKIKELFLGGTAVVVMSGSIARDRLGSRQLPK
SWVTCKSHPGPGQADPISFEEHAQNIKMLCALSGEVPEEPVVSRKTGTVFEKRLILKYIE
ENGKEPGTNEELDPEDLLDVKTSRVVRPRPPNFTSLPSLLKAFQDEWDALVLETYNTREQ
LARTREELATALYQHDAAVRVIARLTKERDEAREALAKLTVTPASAGAANGDAMAVDSES
LPQNLVEHVQELQQQLMKGRKKRPIPQGWASSDEVAALQQVAYADLAVSQASCLGIESDY
AAIGGLDGKLDIYSIQANKVERTIDIGEPVTATVWTGSKVIVATSKGSVKVFDNGSETAS
FQAHAGAVTGLSVHPGGRLLASVGVDKSFIFYDLDTLQKVARGYTDASLTTCAFHPDGNL
FGAGTQTGDVKVFRTDTGEQAETFPLGTPVQTLVFSENGFWFAAAGKGQSTTTIFDLRKS
GAAAQVKELQTGDAQALAWDYTGQYLATAGSTGVTVQMYIKSSKSWSEPLRTSTPATALR
WGAEAKTLVTVSKEGVVSVLGAKE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggccggccacgacgctccgaagctcgacttcgtcaccgtcgacgtcttcacggacacc
cgcttcgtgggcaacccgctcgccgtggttttcgtcccggccgctctccgcgaccgcatc
gatcagtcgaccaagcagcgcatcgcgcgcgagttcaacctctccgagacggtcttcctg
cacacgctcgacaacgaacccaacaggagcgtcacgacccgcgagatcgacatcttcacc
accgaggatgagctgccgttcgccggccacccgaccatcggttcggcctacctggtcctg
aagcacctcggctggagccacgtcgacacgctgcagaccaaggccggacccatccgcatt
gagtcactccaggaccaggaccagggccggggccagggcagagtgagggcggcgatcccg
cacgcggtgcacatccaccagcagacgctcggcgggatcctcgagtcgccgtccgggccc
ctcgccagcgccgcggccgacgccatccggcaaggcctgtcggcggacgccgacatccgc
gccgccgagctggccgccccggtcgtgagcatcgtccgcggcatgacctttgtgctcgtc
cggctgccgagcctcgagcacctggcccgcgtcacgccggcccgccggatcgactttggc
aaggtgcccgagctgctggaccaaggcgagtggcacgacagtttcgtgtcgcggtactac
tacgtcccgcgcggacaggaggcagacgagggagccctcgcggacgacggcagccgctcg
tggaagatccagaccaggatggtggagctgggcttcgaggaccctgctaccggcagcgcg
gcgtgcgcgctggcgagctatctggcggtcaggaacgaggccgtgagaggggcgcgcttt
gagatcacgcagggcgtcgagatggggaggcgcagcgacattgttgtggatacggtcgcg
ctcaaggacaaggagtcgggggaggtcaagatcaaggagctgttcctgggagggacggca
gtcgtggtgatgagcggaagcattgcgcgcgacaggctaggtagtcgccagttgccaaaa
agttgggtaacttgcaagtcgcatccaggcccaggacaagcagacccgatcagcttcgag
gaacacgcgcaaaacatcaagatgctgtgcgcactttcaggcgaggttcccgaggagccc
gtggtgtcgaggaagacaggcaccgtgttcgagaagcgcctgatcctcaagtacatcgaa
gagaacgggaaggaacccggcaccaacgaagaactcgaccccgaagatctgcttgatgtc
aagacgagccgggtggttcggccgcggcctccaaacttcacctccctgccgtcgctcctc
aaggctttccaggacgagtgggacgcgctggtgctcgagacatacaatacaagggaacag
ctggcgcggacgagggaggaattggcaacagcgctctaccagcacgacgctgccgtgcgt
gtcattgcccgcttgaccaaggagcgagatgaggcacgcgaggccctcgccaagctcacc
gttacgccggcatcggctggcgcggcgaacggcgatgccatggcagtcgacagcgagagc
ctcccccagaacctggtggagcacgtccaagagttgcaacaacaattaatgaagggccgc
aagaagcgccccattccccagggctgggctagctccgatgaagttgctgctctccagcag
gtagcgtacgccgacctggccgtttcccaagcctcgtgcctcggcatcgagtccgactac
gcggcgattggcggtctggacggcaagctcgacatctattcgattcaggccaacaaggta
gagaggacgatcgatatcggcgagccggtcacggccacagtttggaccggcagcaaggtc
atagtggcgacgtccaaggggtccgtgaaggtgttcgacaacggcagcgagactgcctcc
ttccaagcgcatgcgggtgccgtgacaggtctctcagtacatccgggcggacgcctcctc
gcatccgtcggcgtggataagagcttcatcttttacgatttggatacgctgcagaaggtc
gcacggggctacaccgatgccagcctcaccacctgcgcgttccacccggacggcaacctc
tttggcgccggcacacagacaggggacgtcaaggtgttcaggacggataccggggagcag
gcagaaaccttccccttggggacgccggtgcagacgctcgtcttctccgagaacggcttc
tggttcgccgcggctggcaagggccagtcaacgaccaccattttcgacctgcgcaagtcg
ggtgccgcggctcaggtcaaggagctacaaacgggcgatgcccaggcgctggcatgggat
tacacgggccagtacctggccacggctgggtcgactggtgtcacggtgcagatgtacatc
aagagctccaagtcgtggtccgaaccgctccggaccagtacccctgcgactgccctgcgt
tggggtgcagaagccaagactctcgtcacggtgagcaaggagggagtcgtgtcggtccta
ggagccaaggaataa
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