KEGG   Thermothelomyces thermophilus: MYCTH_110536
Entry
MYCTH_110536      CDS       T02231                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
mtm  Thermothelomyces thermophilus
Pathway
mtm03020  RNA polymerase
mtm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mtm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MYCTH_110536
  09124 Replication and repair
   03420 Nucleotide excision repair
    MYCTH_110536
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtm03021]
    MYCTH_110536
   03400 DNA repair and recombination proteins [BR:mtm03400]
    MYCTH_110536
Transcription machinery [BR:mtm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     MYCTH_110536
DNA repair and recombination proteins [BR:mtm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MYCTH_110536
SSDB
Motif
Pfam: RNA_pol_Rpb4 Spexin DUF6036
Other DBs
NCBI-GeneID: 11505880
NCBI-ProteinID: XP_003659483
JGI: 110536
UniProt: G2Q2B3
LinkDB
Position
1:join(4707552..4707870,4707952..4708073)
AA seq 146 aa
MSDQNHAPTSRSKPPPPGEEEAGAVLKLGEFENVDTLTLSEASLVLDALLTKRRKDRKDR
NETDVLNKTLDYLDAFARFKEKENVEAVERLLSARKELTKFERAQIGSLCCDGADECKTM
IPSLADKISDEDLQELLDEMAKRMSH
NT seq 441 nt   +upstreamnt  +downstreamnt
atgtcagaccaaaatcacgcacctacgtcccggtcgaagccgccaccgccgggcgaggag
gaggcgggcgcggtgctcaagctgggcgaattcgaaaacgttgacacactgacgctctcg
gaggcgtcgctggtcctcgacgcgctgctgacgaagcggcgcaaggatcgcaaggaccgt
aacgagacggacgtgctcaacaagacgctcgactacctcgacgcgttcgcccgcttcaaa
gagaaggagaatgtcgaggccgtcgagcggctgctcagcgcacgcaaggagctgaccaag
tttgagagggcgcagattggatctctctgctgcgacggcgccgatgaatgcaagaccatg
atcccttcccttgccgacaagatcagcgacgaggatctgcaggagctgctggatgagatg
gccaagcggatgagccattaa

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