Thermothelomyces thermophilus: MYCTH_2118610
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Entry
MYCTH_2118610 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
mtm
Thermothelomyces thermophilus
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtm03041
]
MYCTH_2118610
03009 Ribosome biogenesis [BR:
mtm03009
]
MYCTH_2118610
Enzymes [BR:
mtm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYCTH_2118610
Spliceosome [BR:
mtm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
MYCTH_2118610
Ribosome biogenesis [BR:
mtm03009
]
Eukaryotic type
Pre-60S particles
Helicases
MYCTH_2118610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APP1_cat
DEAD
Helicase_C
LNS2
Motif
Other DBs
NCBI-GeneID:
11509273
NCBI-ProteinID:
XP_003663395
JGI:
2118610
UniProt:
G2QCH4
LinkDB
All DBs
Position
3:complement(join(3790971..3792782,3793617..3793751,3794510..3795206,3795562..3796489,3796589..3797219))
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AA seq
1400 aa
AA seq
DB search
MAPSHKRKTIPDDDFIHTISDNDEPEILEDEDEVVAAAMRPSKKAKTSTNTADAGSKNKK
DKTKKKKKNKKGEKGAQDGEEDAQDNDEEEETGLWGANDADDGAMNSDFEFTLGDGNGVN
AFEGEFDGWGFEGAKKGIEGGAAGQEGKAGVDLDEIIRRRREKKKKTKGKEKGEDSKEDQ
EDGEDVEVEDMGEVDLDDEVLADDAFGMGVEEGEGKDRNGEAEDGEDAASDDDSVATPVP
HPDDEKSDDDDDDDDDEEDAEEEAKRKEFFAAPEETEKATKKGGPSSFQSMSLSRPILRG
LTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFIVPILERLLYRPKKVPTTRV
VILTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGELRLRPDVVIATPGRFID
HMRNSASFAVETVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSTVDKL
IRVGLNKPARIMVDSQKQTAGTLTQEFVRLRPGREEKRMGVEAFRDGKVNFLLATDLASR
GLDIKGIDTVINYEAPQSLEIYVHRVGRTARAGRSGVALTLAAEPDRKVVKAAVKAGKAQ
GAKIISRVIDPAEADKWQAQVDEMDEEIEEILREEKEEKQLAQMEMQVKKGENLIKYEEE
IHSRPKRTWFESQEAKKKAKELGRAELNGIREALKKKGGGKLSNKDKKKLDAKAERTEKK
STGWKKGRAERDGKGAVLNLKKIRKPKAKKGPRLLRFHLDTLSSYKYRLQSRIYRFLVER
QRKRRHRKSIGGAGAAGLSGIPAPTIQSDEEVTEEQRVAREAQEIEKRGQDEKEVANRGG
YSEPPGGSNGNNQASAASPSASPSLPARTPTAPQLDMTEQELAVANANLMARLGPFMTTP
LVQVPITMFFYNEEQSRSHTVTTDDSGHFNVRVPLEFVPTEVRVIANENLSAIRPIEVTG
QKGISLISDVDDTIKQSNISMGAREIFRNALVRDLADLTVDGVEKWYNKMHDMGVKLHYC
SNSPWQLYPVLATFLHTAGLPQGSMHLKHYSGMLQGIFEPVAERKKGTLEAIIRDFPERR
FLLVGDSGEADLEVYTELAVANPGRILAIFIRDVTTPAQTGFFDSSFSVNPGQRSIQGNA
KAMPGARSVGDQFERKPPVPPPPPPPPPPPRVTASPANSGPIMGNLIDFGEPDPIVSTAA
TERLCGREHNRDALGPDGSSSDVARRKPPPPRPVKPAALRSTPSDSSSTNSQRTTSAETG
GGHSLPARPRTSAGTPPPNTSKPTPPPPPPRRRRGTAPAMQQPRSTGDDHIPDVSDAESL
SAMPGGYPAGVADSATPPNGAAAAAAVNKKVDLWLMRLARAHQTLDAQGVKLYTWRRGQD
VIAEAEGLVREALRNMDHGS
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttctcacaaacgcaagaccattcccgacgacgactttatccacaccatctcg
gacaatgacgagcccgagatcctcgaggacgaggatgaggtagtggctgctgcgatgagg
ccgtccaaaaaggccaagacctccaccaacacggccgacgctggcagcaagaacaagaag
gacaagacgaagaagaaaaagaagaataaaaagggagagaagggtgcccaggatggcgaa
gaagacgcacaagacaatgacgaagaagaagagaccggtctctggggcgccaacgatgcc
gacgacggggcgatgaactcggactttgagttcaccctcggcgacggcaacggggtgaac
gcgttcgagggcgagttcgacggctgggggttcgaaggagccaagaaggggatcgagggc
ggcgccgccgggcaggagggcaaggcaggggtggacctggacgaaatcatccggaggagg
agggaaaagaagaagaagacgaaggggaaggaaaagggagaggactccaaggaggaccag
gaggacggggaggatgtcgaggtcgaggatatgggggaggtggatctagacgacgaggtg
ttggccgatgatgcgttcgggatgggggttgaagaaggggaggggaaggacaggaacgga
gaggccgaggatggagaggacgccgcgtcggatgatgattcggttgctacgcccgtacca
catcccgatgacgagaagtcagacgatgacgacgacgacgatgatgacgaagaggatgcc
gaggaggaggcgaagcggaaagagttcttcgccgcgccagaggagacagaaaaggccacc
aagaagggcggaccgtcctctttccagagcatgtcgctctcgcgacccatcctcaggggt
ctcacgtctgtcggcttcacgaaaccgactcctatccaggccaagacgataccgatcgcc
cttatgggcaaggacgtcgtcggtggtgctgtcaccggttccggcaagacggctgcattt
attgtgcctatcctggaacgtctcctgtaccgacccaagaaggtgccgacgacgagggtc
gtcatcttgacgcccacccgcgagctcgcgatccagtgccactcggtggcgaccaaacta
gcaagccataccgacatcaagttctgtcttgcggtcggtggtctcagcctgaaggtccag
gagggcgagctccgtctgagaccagacgtggtaatagccactccgggtcgcttcatcgac
cacatgcgaaactcagccagctttgctgttgagacggtcgagattctggtgcttgatgaa
gccgacagaatgctcgaggacggtttcgcagacgagctgaacgagattctcacgactctc
ccgaagtcgcgccagacgatgctattctccgccaccatgacctcgacagtcgacaagctc
attcgggtcggcctcaacaagcctgctcggatcatggtggactcgcagaagcagacggcc
ggcaccctcacacaagagtttgtgcggttgcggcccgggcgggaggagaagcgcatgggc
gtcgaggccttcagggacggcaaggtgaatttcctcctcgccaccgacctggcgtctcgt
ggtttggacataaagggcatcgacaccgtcatcaactacgaagccccgcagtccttggaa
atctatgtccatcgtgtaggccgtacggctcgtgctggccgtagcggtgttgccctcacg
ctggcagcggaaccagaccgcaaagtggtgaaggcggcagtcaaggccgggaaagcacaa
ggcgccaagatcattagtcgagtgatcgacccagcagaagcggacaagtggcaggctcaa
gtggacgagatggatgaggagattgaagagattcttcgcgaggagaaggaggagaagcag
ctcgcacagatggagatgcaggtcaagaagggcgagaatctgatcaagtacgaggaggag
atccattcgcggccaaaacggacatggttcgagtcacaggaggccaagaagaaggccaag
gaactcgggcgggctgaactcaacggcatcagggaggcgttgaagaagaaggggggaggc
aagctcagcaacaaggacaagaagaagctcgatgccaaggcggagaggaccgagaagaag
tcgaccgggtggaagaaggggcgagcggagagagacggaaaaggtgcggtattaaacctg
aagaagattcgcaagcccaaggcgaagaaggggccgcgcctcctccgctttcacctcgac
actctctcgagttacaagtaccgcctgcagagccgcatatacaggttccttgtcgagaga
cagcgcaagaggcggcacaggaagagcattggtggtgctggcgctgctgggctgagcggg
atcccggcgcccacaattcaatcggatgaggaggtgaccgaggagcagagggtagcgcgg
gaagctcaagaaatcgagaagcgaggacaggacgagaaggaggttgcgaacaggggaggg
tacagcgaaccccccggtggttccaatgggaacaaccaggcttctgctgcgtcgccatcg
gcgtcgcccagcttgcccgcgagaacgcccaccgcgccacaattggacatgacggagcaa
gagctcgcggttgccaacgcgaacctcatggcacgcctgggaccgttcatgaccacgcca
ttggtccaagtaccaatcaccatgttcttctacaacgaggagcagtcacggtcgcataca
gtaacgacagacgattccgggcacttcaacgtccgggtgcccctcgagtttgtcccaaca
gaggtcagggtcatagcgaacgagaacctctcagccatccggcccatcgaggttaccggc
cagaaggggatcagtctgatcagcgacgtcgacgacacgatcaaacagtccaatatctcg
atgggcgcccgagagattttcaggaacgcgctcgtgcgcgacctggcggatttgactgtc
gatggggtcgagaaatggtacaacaagatgcacgatatgggcgtcaagttgcactactgc
tcaaacagcccgtggcagctgtacccagttctggcgacgttccttcacacggccggactg
cctcagggctccatgcatttaaagcactatagcggcatgctgcaagggatattcgagccc
gttgcggagagaaagaagggcacactggaggccatcattagggactttccagaaagaagg
ttccttctcgttggcgacagcggcgaggcggatcttgaggtctataccgagcttgccgtg
gccaatcctggccgcatcttggccatcttcatccgcgacgtcaccactcctgcgcagacg
ggattctttgattcttcattcagcgtgaatccgggacagcggagcatacaagggaacgcc
aaagccatgccgggcgcccgctcggtcggcgatcagtttgaaaggaaaccaccagtgcct
cctcctcctcctcctcctcctcctcctcctcgagtgacggcttcgccggctaattcggga
cctatcatgggaaacctgatcgactttggcgagccggatcctatcgttagcactgcagcg
accgagaggctctgtggaagagaacataaccgggacgcgttgggacctgatgggtcgagc
tcagacgttgcccgtcgaaaaccaccacctccgcggcccgtcaaacctgcggccttgcgg
agcaccccatcggatagcagcagcaccaacagtcagagaaccacctctgccgaaactgga
ggcggtcatagcttgcctgctcgtccacggacctctgcgggcacgcctcctcccaacact
tcaaagccaacccctccaccacctcctcctcgacgccgccgcggcactgccccggcgatg
cagcagccacgcagtacgggcgacgaccacatcccagacgtatccgatgcagagtctctc
tctgcaatgccaggcggatatcctgccggcgttgcagattcagcgactcctcccaacggc
gcggctgccgccgcagctgtcaacaagaaggtggacttgtggctgatgcggttggcgagg
gcacaccagacgctggatgcgcagggggtgaagctgtatacttggcgaagaggccaggac
gtgattgccgaggcggagggtcttgtgcgggaggcgctgaggaatatggaccacggcagc
tag
DBGET
integrated database retrieval system
