| Entry |
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| Name |
(RefSeq) hypothetical protein
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| KO |
| K12605 | CCR4-NOT transcription complex subunit 2 |
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| Organism |
mtm Thermothelomyces thermophilus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mtm00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCTH_2132689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mtm03019]
MYCTH_2132689
Messenger RNA biogenesis [BR:mtm03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MYCTH_2132689
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MYCTH_2132689
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(join(8890610..8890681,8890755..8891100,8891159..8891923,8892487..8892643,8892731..8893001,8894114..8894308,8894362..8894863,8894920..8895016,8895075..8895086,8895149..8895232,8895303..8895402))
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| AA seq |
866 aa
MDLDDDAPPELVSTGTDLEPEEKPVKVPITLITGYLGAGKTTLLNYILTAEHGKKIAVIM
NEFGDSLDIEKSLTINKDGESVEEWMDVGNGCICCSVKDTGANAIESLMEKKGKFDYILL
ETTGLADPGNIAPMFWMDDGLGSTIYLDGIVTLVDAKNILRSLDDPAGKVEGHEDGEDAH
GPVMTTAHVQISHADVIIINKSDLVSEQELQAVKDRIESINGLAKVFTTTQSVVPKLEGF
LLDLHAYDTVDGLDRPGLGHSHIDKTISTISILLPELTEEQQSALDAWLRSVLWENVLPG
HEPTGGPAYDIHRLKGRFFTDSGKEKIIQGRWVGFWFKARLGEPDVAESSRTALPSPSIH
PTAAIVTIVEYPGGEYADAHAMIGGVPQALRGMPNGFAGQQQQQQQSGRAVSNRLPNGKI
GPVGNAAGWGFGGGMPMGGSASVPPGAARPLGGNVSFAQSLTGSQPATPLDLAEFPTLSN
SNQLNSANQSSMWSAQGPRNLGAGVHRGGGTPISSQQNQQDDMFASRLASAQSSYRYGNQ
GTGSQAAQGQSGVADDFPPLNRSANGEMGGQERGGNLMSSLGFGSQGSASGSAMHANRAG
NGLLNALSATSRAADVRSPSAIARPQDSRSPAEDESRQKGTGYREDSAGAVAGKNPHGAI
GNDPPTGKGKEEEKGSASQVQDPLEGMAPIDKWGLKGLRTLMNNFPDYNALTCGLDPASL
GVDMRSTDLLSAKVYSLYEDAPPRSPVPKFRLPDCYQVKNVQPIEAKISSFNEETLMWIF
YSCPRDIKQQMAAIELNNRNWRWHKKMQMWLTKDDVMVPQSLGPAHERGYYIVWDTANWR
KERRELVLHYADLDTTPTAQLQSIGA |
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| NT seq |
2601 nt +upstreamnt +downstreamnt
atggacttggatgacgacgcaccaccggagctggtctctaccggcacagatctggagccc
gaggaaaagccagtaaaagtacccatcacgctaattactggatacctcggtgcgggaaag
acgacgctattaaactacatcctgaccgccgagcatggcaaaaaaatcgcggtcattatg
aatgagtttggggactcgctggatattgaaaagtccttgaccatcaacaaggacggcgag
tcggtcgaagagtggatggacgtgggcaacggctgtatatgttgctcggtcaaggatacc
ggagcgaacgccatcgagtcgctgatggaaaagaagggcaagtttgactacatcctcctc
gagaccacaggtcttgcagaccctgggaacattgcccccatgttctggatggacgacggg
ctcggcagcaccatctacctggatggcatcgtaaccctcgtcgacgccaagaacatcctc
cgtagcctggacgaccccgcagggaaagtcgagggccacgaggatggcgaagatgcgcat
gggccggtcatgacaaccgcccatgtacagatctcccacgccgatgtcataatcattaac
aagtccgacctggtgagcgagcaggagctgcaggccgtgaaggataggatcgagtccatc
aacgggctggccaaggtcttcaccacgacccagagtgtcgtgccgaagctcgaagggttc
ctgctcgacttgcacgcctacgacactgttgatggtctcgaccgtccaggactcggccac
agtcacatcgacaagaccatctcgaccatttcgatcctgctcccagagctgaccgaggaa
caacaatcggcgctcgatgcgtggttgcgctcagtgctgtgggaaaacgtcctccccggc
cacgagccgacaggcggccccgcgtacgatatccatcgactgaagggccgcttctttacc
gatagcggaaaggaaaagatcatccagggaagatgggtcggattctggttcaaggcgcgg
ttgggcgagccggatgtcgcagagtcctctcgaacagcgctcccgtcaccgagcatccac
cccactgctgctatcgtcaccattgtcgagtaccccggaggagaatatgctgacgcgcac
gcgatgatagggggtgtaccacaggcgcttcgcggcatgcccaatgggttcgcaggccag
caacagcaacaacagcaatccggccgggccgtctcgaacaggttaccgaacggaaagata
gggccggtcgggaacgcggcaggatggggtttcggcggtggcatgcctatgggggggagc
gcaagtgtgcccccgggcgcggcgagaccactaggaggaaacgttagcttcgcgcagagc
ctgacggggtcacagccggcaacgccacttgacctagcagagtttccaacgttatccaat
tcaaaccagctcaactcggcaaaccagtcgtccatgtggtctgcgcaaggtccccggaat
cttggtgcgggcgtccatcggggaggggggactccaatctcgtcgcagcagaatcagcaa
gacgatatgttcgcctcgcgtttggcttcggctcagagctcatatagatacgggaaccaa
gggaccgggtcccaagcagctcaagggcagtctggtgtagccgacgattttccgccgctg
aaccggagcgcaaacggagagatgggcgggcaggagcgaggaggtaacctgatgtcaagc
ttggggtttggctcccagggctcggcttccgggtccgcgatgcacgcgaatcgggcagga
aacggtctgctgaacgcgctgtctgcgacgtcgagggccgcggacgttcgctcaccgtcc
gcgatagcgcgaccacaggactcacgtagtccggccgaggatgagtcgcgccagaagggg
actggatatcgcgaggattcggcaggcgcggtagccgggaaaaaccctcacggcgcgatc
ggcaatgaccctccgacaggaaagggcaaagaggaggagaagggttctgccagccaggtg
caagatcctctagaggggatggcacccatcgataaatggggcctgaaggggctccggacg
ttgatgaataatttccccgattacaatgcgctgacgtgcgggctcgacccggcgtcgctg
ggggtggacatgcgctcgacagacctgttgtcagcgaaggtctactcgctctacgaagat
gctccgccgcggtcgccggtgcccaagttccgtcttcctgactgctaccaagtgaagaac
gtccagccgatcgaggccaagatctcgagcttcaacgaggagacgttgatgtggatcttc
tacagctgcccgcgggatattaagcagcaaatggccgcgatcgagctcaataaccgcaac
tggcggtggcacaagaagatgcagatgtggctgactaaagacgacgtcatggtgccccag
tccttgggtcctgctcacgagcgcgggtattacatcgtctgggacacggccaactggcgc
aaggagaggcgagaactggtgttgcactatgccgatcttgatactacgcctaccgcccag
ctgcagagcataggagcttga |
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