Thermothelomyces thermophilus: MYCTH_2294008
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Entry
MYCTH_2294008 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03013
Nucleocytoplasmic transport
mtm03015
mRNA surveillance pathway
mtm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCTH_2294008
09122 Translation
03013 Nucleocytoplasmic transport
MYCTH_2294008
03015 mRNA surveillance pathway
MYCTH_2294008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2294008
03041 Spliceosome [BR:
mtm03041
]
MYCTH_2294008
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MYCTH_2294008
Spliceosome [BR:
mtm03041
]
Complex C
Other components
EJC/TREX
MYCTH_2294008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
PRC2_EED_ins
RRM_5
Motif
Other DBs
NCBI-GeneID:
11513129
NCBI-ProteinID:
XP_003658354
JGI:
2294008
UniProt:
G2PZN4
LinkDB
All DBs
Position
1:join(148926..149246,149431..149676)
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AA seq
188 aa
AA seq
DB search
MASEAMDLDEPVRQGRGDGSASNNIIINNNNNNNNNNSSSNDVSSAKLAAMQTATKATAV
RSIEGWIVMVTNVHEEADEEAIHDKFGEFGEIRNVHLNLDRRTGYVKGYALIEYTTLEEA
RAAIDGANNTDLLGQTVKVDFAFVRPPPGKATNNTRPGGGGGGAARGSNRGARSGRSRSR
SPGAGRDD
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgaagccatggacctcgacgagccggtccggcaaggacgcggcgacggctcg
gcgtccaacaacatcatcatcaacaacaacaacaacaacaacaacaacaatagcagcagc
aacgacgtgagctcggccaagctggccgccatgcagacggcgaccaaggcgacggcggtg
cggtcgatcgagggctggatcgtcatggtgaccaacgtgcacgaggaggccgacgaggag
gccatccacgacaagttcggcgagtttggcgagatccgcaacgtgcacctcaacctggac
cgcaggaccggttacgtgaagggctacgcgttgatcgagtacaccacgctggaggaggcg
cgcgcggccatcgacggcgccaacaacacggacctgctgggccagacggtcaaggtcgac
tttgcctttgtgcggccgccgccgggcaaggcgaccaacaatacgcggccaggcggcggc
ggcggcggtgccgcgcggggatcgaaccgcggggcgcgcagcgggaggagccggagccgc
agtcccggcgcggggagggatgattga
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