Thermothelomyces thermophilus: MYCTH_2295178
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Entry
MYCTH_2295178 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCTH_2295178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtm03041
]
MYCTH_2295178
Spliceosome [BR:
mtm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
MYCTH_2295178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
PRP4
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
WDR54
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_RIG_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
11505801
NCBI-ProteinID:
XP_003658858
JGI:
2295178
UniProt:
G2Q414
LinkDB
All DBs
Position
1:join(2235748..2235795,2235877..2235907,2235970..2237489)
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AA seq
532 aa
AA seq
DB search
MMHPSRKAYVEDAEPENQGGVDLDAIPIDRDYNIPSASAGIAPEKASALLSQFERRRLAA
TIAVPTDDARVRAKLRELGHPITLFGEGPADRRDRLRELLTEQVQAQQASAQEKADVEMQ
DAEKEEEEEEAEEQEEEFYSRGTDELLQARRDIAQFSIPRAKRRIEFQKREATIPLRTHA
KFRKGIKDRLQSFELQGSQTAGDRHVSMTRISPNGKMVATGNWGGQVKLLDIPTLEHKRT
LRGHTNKISGISWMPGATLPERNVSEETVNLASGGAEGQIHLWSLSQDTPLATLSGHSQR
VCRVEFHPSGKYLASASEDTSWRLWDVATSTELLLQEGHSRGVYAVSFNTDGSLLASAGL
DSIGRVWDLRSGRTVMILDGGTDGHIKPIYGLDWGSDGHRVLSASADGWIKCWDVRKVQQ
QGGIGAHTSAVADVRWFKGLDDPVEGTPPGQDEKGAQLPKKSGTFFVSAGFDHKVNVFSA
DDWALVQPLTGHTGPVASVDVSRDGRWIVSGGHDRTVKLWGRNDSAGMFGDD
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacccatcacgcaaagcttatgtagaagatgccgagcccgagaaccaaggcggc
gtcgatctggacgctatcccaatcgaccgtgactataatatccccagtgccagcgctggc
attgcccccgagaaggcatcagctcttctctcacagttcgaaaggcgaaggctagcagca
accattgctgtcccgacagacgatgcgcgagtacgagcgaaactccgggaattgggccat
cccatcacgctcttcggcgagggtcccgcggataggcgagacaggttacgagagcttctt
accgaacaagtgcaggcgcaacaagccagcgcccaggagaaggccgacgtggagatgcag
gatgccgagaaggaggaggaggaggaggaggctgaagaacaagaagaggagttttactcg
aggggaacggacgagctcttacaggcacgaagagacatcgcccagttttctataccgcga
gcgaaacggcgcattgaatttcagaaaagggaagcgaccattccgctgcgcacgcacgcc
aagtttcggaaaggaatcaaggaccggcttcagagcttcgagcttcagggcagtcagacg
gcaggagaccgtcacgtctccatgaccaggatctcgccgaacgggaagatggtggcaacg
gggaattggggcggccaggtcaagctgctcgacatcccaacactagaacacaagcgaaca
ctcagaggccatacgaacaagatcagcggtatctcttggatgcctggcgctacgttgccc
gagcgcaacgtctcggaagagacggtcaacctagcatcgggcggtgcggagggacagatt
cacctatggtcactctcgcaagatactccccttgcgacgctctccggccactcgcagcgg
gtatgtcgcgtcgagttccacccgtccgggaagtacttggcatccgcgtccgaggacacc
tcgtggaggttatgggatgtcgcgacttccacagagcttcttctccaggagggccactcg
cgcggagtgtacgcggtcagcttcaacacggacgggtccctgctggccagcgccggcctg
gacagtatcgggcgtgtctgggacttgcgctcgggccggacggtcatgatcctcgacggc
ggcaccgacggccacatcaagcccatctacggcctcgactggggctcggacggccaccgg
gtgctgtcagcatccgccgacgggtggatcaagtgctgggatgtccggaaggtgcagcag
cagggtggcatcggcgcgcacaccagcgccgtggccgacgtcaggtggttcaagggtctc
gacgatccggtcgagggcactccgccgggccaggacgagaagggcgcgcagcttcccaag
aagtcgggcacgtttttcgtctcggcaggattcgaccacaaggtgaatgtgttctcggcg
gatgattgggctctggtccagccactcacgggccatacgggccctgtggctagtgtcgac
gtaagcagggacgggagatggattgtcagcggcggccatgatcggacggtcaagctctgg
gggaggaatgattcggcaggcatgtttggcgatgactag
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