Thermothelomyces thermophilus: MYCTH_2295254
Help
Entry
MYCTH_2295254 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm04138
Autophagy - yeast
mtm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
MYCTH_2295254
04148 Efferocytosis
MYCTH_2295254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtm04131
]
MYCTH_2295254
Membrane trafficking [BR:
mtm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
MYCTH_2295254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
TPR_VPS8_2
VPS8_N
TPR_Vps41
Beta-prop_EML
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-RING_UBOX
zf-RING_2
zf-RING_5
Beta-prop_HPS5
zf-rbx1
zf_RING_Vps8
PHD_NSD
WD40_CDC20-Fz
Beta-prop_WDR3_1st
zf-C3HC4
zf-RING_11
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
11512798
NCBI-ProteinID:
XP_003658884
JGI:
2295254
UniProt:
G2Q440
LinkDB
All DBs
Position
1:complement(join(2316535..2320790,2320855..2321290,2321356..2321667))
Genome browser
AA seq
1667 aa
AA seq
DB search
MADEPELHPADDASSSSDDGETVKGERDEDHITDVIEQEEPETDSDAHRPAGPSSIAHRY
GELVEAGRETPSEDDGSTDAAPPRVAVSPIGSPLSVPDDTPSIQGSAVSSPSSSLLPSRA
SRPGLASPTPSFRPFDRRFQSRISSPHLTSPRPSSPALWSTHSRNVSLSSQLLLDPGGSE
PPSPPWEVVRWTKLRKLNGQVFSESGRRNFGSPTCLAVSATVVLGTSKGIILVFDYNQNL
KLIIGPGTKAVESGPVTAIAISADHTTIAGGHANGNIFTWDTSRAARPFLSIPHLDPVHR
QKSPPSDGHVQNVKVTHLGFLGTRHTALVSADDRGMAFSHLATRGTGALGRTVKTTRILG
RYPDSQPPPGKTVKPSTVLAFASLPLGNVEMATDTMGLTAMLTPYLLVIVSTTPIAQTQH
KSARPKEVAAHSPMTGCLAWFPAVKLKVADPVTGSQISKVKLVYCWSNVLTVLDVDEIPS
EDKDKPPSLRFRARSRWKCEEAIVAVQWLSRSVLTVLTISQRLIVLEDRSMRMTEAFDLI
HKHIYHVDLFSKQLGALVEQLDEEDPSMHGVVADAFYMSFRTYKGRIFLLGFNDVSIGAL
SNWADRLIALMENGDYVGAIKLATSYYTGDTNKLTVGLPEDATLRHSMVQDKLVEIMSAS
LKYAFGQRQKNRDSVDDRHLQELSETCFTACLSVGDVDFLFDEMYEWYEDAGVEGIFLET
LEPYVLDRSITSIPPVVVKAMVAHFVYKGWESRLEEVICHLDTATLDLDQITLLCKQHSL
YDALLYVWNQALRDYITPLFDLLSLLVPIMQNGQSSGDQMDAEISAVNALKIFPYLSYIL
TGRVYPTGEALPEDVARNAKAELYWLLFSGKSVTWPKGSNKRLLTRPSQSQEPSFPYLRL
ILSFDAASFLSALNEAFEDSFLNDSSEEPNGSPGRDLPEEQIFGLTVNRQYIVSILMEIM
ASPEFSSNETIYLDMFIARNLPKYPQYLLFPGSTLDKVLVGLCKYPGRDLAEDAQLSAEY
LLSVYQPADVTELIPLFREAGFYRILKRIYRGDKQYGRLIQTYFEDPEDQEDVFNCIDTY
LRPRAGLTRRQTQDILRVIKQHSAELVSLDPAMAAQTIARHAPELHQDVLDSVAAQPGLQ
YAYLRAILEPEKDTGVGRSTDRDLVEHYLRLMCQFDPDHVSDYVGLVQSSNLRLEQLLPT
MEETGVIDAAVILMAKEGQIQEAMGRLVKHLETLESALQGLLDGSRDDARHLQTSAEELV
HALRKFVMVGIWLCQGQTKTSRAAVSSWRGRKASPDGTLSADENLWLDLIDTAVQITRRL
SSKLQPPPDNSPSTADGNADTHPPGQLDTDKLLTMLRSLVQTAFTALLNSTSTVFPASTF
ASSSSSSSSSRSPAETTAAIARQNTVAATGIGTNLAFLRILRAFLTRAAAASPNLADLRA
VLASVFSAYAYEESILRLSNRLLERSLFVGVSQAVELRQRGWRPRGSTCEACGKRVWGPG
VAGGRAVWEAWEGREREAARARRRKRELNGKGVGHSGSGGMTMMMMMMSGADEDGGGEEY
TGKGKGKGKDLGLRWRQEAEQKKEEEEEKGGEGTGEGADCEGSDGKIDPRKEGFEGMVGA
AQRETQQGLGPLVLLACRHIYHQSCLEALLAKDGSGREGEYRCPIDG
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaaccagaactgcaccccgccgacgacgccagctcaagctcggatgacggg
gagacagtgaagggcgagcgggacgaggatcacattaccgacgttatcgagcaggaagag
cccgagacggactcggatgcacatcgcccagctgggcccagctccattgcacaccgctac
ggagaactggtcgaggcaggacgcgagacgccgtccgaggatgatgggtcaacagatgcc
gcaccaccccgggtcgcggtcagccccattggttctccgctctctgtcccagacgatacg
ccgtctatacagggttccgccgtctcctcgcccagcagcagcctattgccctcccgtgcc
tcccgtcccggcctggccagcccgacgccttcgtttcggcctttcgatcggcggttccag
tcccgtatctcgtcgccacacctcacctccccacgcccctcttcgcccgcactctggtcc
acacacagccgcaacgtatcgctaagcagccagttgctgttggatccggggggatccgaa
cccccctcgccgccgtgggaggtcgtgcgctggacaaaactgaggaagctcaatgggcag
gtgttttccgagtcgggcaggcgaaactttggctcaccgacatgccttgccgtttcggcc
actgtcgtgttgggcacttcgaaggggatcatccttgtgttcgactacaaccagaatctc
aagttgataatcggcccggggacgaaagctgtcgaatccgggccagttaccgcgatcgcc
atatcggcggatcacaccaccattgccggcggacatgcaaacggcaacatattcacgtgg
gacacctcaagagctgcaaggcccttcctcagtatccctcatctagatccagtacaccga
caaaaatcgccgccgagcgacggtcatgtgcagaacgtcaaagtgacgcatctgggtttc
ctcggcacccggcacacggctctcgtatccgcggacgatcgcggaatggccttctcgcac
ctcgcgaccaggggcaccggagccctcggtaggaccgtcaagacgacgcggatattgggg
cgatacccggattcacagccgcctccggggaagaccgtgaagcccagcaccgtcttggcc
tttgcgtctctccctctgggaaacgtcgagatggccaccgacaccatggggctcaccgcg
atgctcactccctacttgctcgtcatcgtctccaccaccccgattgcccagacccaacat
aaatccgcccggccaaaggaggttgccgcccacagccccatgacaggttgtttggcttgg
ttccccgccgtcaagctgaaagtggccgaccccgtcactggcagccagatctccaaggta
aaactggtgtactgctggtcgaacgtcctcactgtcctggatgtcgacgagatcccctcg
gaggacaaggacaagccgccgagcctcaggttcagggcacggagccggtggaaatgcgag
gaggcgatcgtcgcagtgcagtggttgagccggtcggtcctgaccgtcctcacaatctct
caacggctcattgttctcgaggaccggagcatgcgcatgaccgaggctttcgacctgatt
cacaaacacatatatcacgtcgacctcttttcgaagcagcttggcgcgctggtcgagcag
ctcgacgaagaagacccgtcgatgcacggtgttgtcgccgacgccttctacatgagcttc
agaacctacaaaggacggatattcctccttggattcaacgacgtgtcgataggggcactg
tcgaactgggccgaccgcctcatcgcgctcatggagaatggcgactacgttggcgccatc
aagctcgcaacatcgtactacacaggagataccaacaagctcaccgtcggtttgcccgaa
gatgccacgttgaggcactccatggtccaggacaagctggtggaaatcatgagcgcgtcg
ctgaaatacgcctttggccagaggcagaagaacagggattctgttgacgaccgccatctc
caagaactgtccgaaacgtgttttactgcctgtctgagcgtcggcgacgtcgactttctc
ttcgacgagatgtatgagtggtacgaagacgccggggtcgagggaatctttctcgagacc
ctggagccttacgtccttgaccggtcgatcacttccatcccgccagtggtcgtgaaggcg
atggtcgctcactttgtttacaagggctgggagagccggctggaggaggtgatttgtcac
ctggacactgccacgctcgacctggaccagatcacgcttctctgcaagcagcacagcctg
tacgacgcgttgctctacgtgtggaaccaggcattgagagactatatcacaccgctgttc
gaccttctctctctgctcgtaccgatcatgcaaaacgggcagtcctcgggcgaccagatg
gacgccgagatatccgcggtgaacgcgttgaagatcttcccctacctttcctacatcctt
actggaagagtttacccaacgggcgaagcactgcccgaggatgtcgcgcggaacgccaaa
gccgagctctactggctgctcttctcggggaagagcgtcacatggccgaagggtagcaac
aagaggttgctgacgaggccgagccagtctcaagaaccttcattcccttatcttcggcta
atcttgagctttgacgccgcaagcttcctgagcgctctcaacgaagcctttgaggattcc
tttcttaacgactcctcggaagagccgaatggaagtcccggccgggatctgcccgaggag
cagatcttcggcctgacggtgaacagacagtacatcgtctcgatcctgatggaaatcatg
gcctcgccggagttctcctccaatgagaccatttacctggacatgtttattgccaggaac
ctgccgaaataccctcaatacctcctcttccccggctcgaccttagacaaggtcctggtt
gggctctgcaagtatcccggccgggatctagcagaggatgcccagctcagcgccgagtat
ctcttgtctgtgtaccaaccagcagatgtcacagaactcatcccactcttcagagaagcc
ggtttctaccgcatcctgaagcgcatttatcgaggcgacaagcagtacggtagactgatc
caaacctacttcgaagacccggaggatcaggaagacgtcttcaactgcattgacacgtat
ttgcggccccgagcaggtctcacgcggcgccagacccaggacatccttcgggttatcaag
cagcattcggcggagctcgtcagcctcgaccccgcgatggcagcccaaaccatcgctaga
cacgcgcccgagctacaccaagacgtcttggattcggtggctgcgcagccgggccttcag
tacgcgtacttgagggcaatactggagccggaaaaggatactggcgtgggccgctcgacg
gacagagaccttgtggagcactacttgcggctgatgtgccagtttgatcctgaccacgtc
tcggattatgttggtttagtccagtcttcgaacctaaggcttgaacagctgctcccgacg
atggaggaaacgggcgtgatcgatgcggccgtcattctcatggccaaggagggccagatt
caagaagccatgggacgcttggtaaagcacctcgaaactctcgagtcggcattgcaaggc
ctcctcgacggttcccgagacgatgctcgtcacctgcaaacgtccgccgaggaactggtg
cacgcgttgcgcaagttcgtcatggtgggcatctggctatgccaggggcagaccaagacg
tcgcgggcggccgtgtctagctggcgaggccggaaagcgtcgcccgatgggacgctttcg
gcagatgagaatctctggcttgatctgatcgacacggcggtgcagatcacaagacggctg
tcctccaagctgcagcccccgccagacaattctccttccacggccgacggcaacgcagac
acacatcccccgggccaattggacactgataagctgctcaccatgctacgctccctcgtt
cagacggcttttaccgccctgctcaactccacgtctactgttttccctgcgtccacgttt
gcctcctcctcctcctcctcctcctcctccaggtcccccgccgagacaacggcagcaata
gcccgacaaaacacggtcgccgccacggggatcgggacgaacctggccttcctccgcatc
ctgcgggcgttcctcacccgtgcggcggccgcgtcgcccaacctggcggacctgcgcgcc
gtgctggcgtcggtcttctcggcctacgcctacgaggagtcgatcctgcggctgtcgaac
cggctgctcgagcgctcgctgttcgtcggcgtctcgcaggccgtcgagctgcgccagcgc
gggtggcggccgcggggctcgacgtgcgaggcgtgcggcaagcgggtctggggtcccggc
gtggcgggcgggagggcggtctgggaggcctgggaggggagggagcgggaggcggcacgg
gcgaggaggagaaagagggagctgaacgggaagggggtgggccactcggggagtggtggt
atgacgatgatgatgatgatgatgagcggcgcagatgaggacggcgggggggaggagtat
accggaaaggggaaggggaaggggaaggacttgggtctgaggtggaggcaggaagcagaa
cagaagaaggaggaagaggaggagaagggaggggagggcacaggcgagggcgcagactgt
gagggctcggacgggaagatagatccgcggaaagagggtttcgaggggatggtgggcgcc
gcgcagagggagacacaacaggggctggggccgctggttttactggcgtgcaggcatatt
taccaccagagctgcctcgaagcgctgctggccaaggatgggtcggggagggaaggggaa
tatcggtgccccattgatgggtag
DBGET
integrated database retrieval system
