Thermothelomyces thermophilus: MYCTH_2296291
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Entry
MYCTH_2296291 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03018
RNA degradation
mtm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCTH_2296291
09123 Folding, sorting and degradation
03018 RNA degradation
MYCTH_2296291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2296291
03041 Spliceosome [BR:
mtm03041
]
MYCTH_2296291
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MYCTH_2296291
mRNA degradation factors
5'-3' decay
Lsm complex
MYCTH_2296291
Spliceosome [BR:
mtm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
MYCTH_2296291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
11513049
NCBI-ProteinID:
XP_003659364
JGI:
2296291
UniProt:
G2Q121
LinkDB
All DBs
Position
1:join(4119104..4119128,4119212..4119288,4119411..4119602)
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AA seq
97 aa
AA seq
DB search
MSLNSYTEKKVCIITTDGRNLVGTLAAHDHTTNLVLKNTVERVIRSPEDGEPSVEVPLGL
YIVRGENVCVVGLVDEALDASINWAEVKGAAIGTTKH
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttaacagctacaccgagaaaaaggtgtgcatcatcaccaccgacgggcgcaac
ctcgtcggcaccctcgcagcgcacgaccacaccaccaacctggtgctgaagaacacggtc
gagcgcgtgatccgcagtcccgaggacggcgagccgtcggtcgaggttcctctgggtctg
tacattgtccggggcgagaatgtctgcgtggtcggcctcgtagacgaggcgctggatgcg
agtatcaactgggctgaggtcaagggcgcggccattgggacgacgaagcactag
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