Thermothelomyces thermophilus: MYCTH_2296350
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Entry
MYCTH_2296350 CDS
T02231
Name
(RefSeq) CDH1-like protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mtm
Thermothelomyces thermophilus
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtm03021
]
MYCTH_2296350
03036 Chromosome and associated proteins [BR:
mtm03036
]
MYCTH_2296350
Transcription machinery [BR:
mtm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
MYCTH_2296350
Chromosome and associated proteins [BR:
mtm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
MYCTH_2296350
SLIK complex
MYCTH_2296350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Chromo
HTH_Hrp3
Helicase_C
CHD1-like_C
HDA2-3
ResIII
Cdh1_DBD_1
DEAD
Chromo_MIT1
AAA_22
Motif
Other DBs
NCBI-GeneID:
11508278
NCBI-ProteinID:
XP_003659385
JGI:
2296350
UniProt:
G2Q1F0
LinkDB
All DBs
Position
1:join(4216776..4217180,4217241..4217267,4217324..4217423,4217493..4221546,4221608..4222034)
Genome browser
AA seq
1670 aa
AA seq
DB search
MSTSPDPGPVNGHTSPSPDEHSTHVADAAQSNSHLSDTQPSGVGGASPDSADDAGSADDE
PEFAPDEQDDASHSSEHDAPDDADFNEEDSPASAQSNDASDRPVSASTAPKRKAAHILDD
EYIRENPELYGLRRSSRPSQRRKVVESDGDEDESDSDVTPARRKSSNKRRRLERSQPTSK
RGTPARQPSVDDSDSDTYGGAKARSFRKKVRRQQELQPTLALAEKRWSNRRAAQVSAGAY
QESDVDDEEEDEVTPGYWAADLEDNSPYIEKILRHRPKEGVELSPESTRHDFEYYIKWQG
KSHLHNTWETTESVAGFRGFRRLENYFKKTVEYELDLKFGGDEISPEQREQWLLDREREE
EALDDYTKVERIVSVRDGENGMEYFVKWKGLQYDDCTWEDAALISSHAQDKIDQFLDRST
RSWQSDRKQANLDTRSRMTKLEKQPPYIKGGELREFQLKGLNFLALNWTRGNNVILADEM
GLGKTVQTVSFLSWLRNDRGQEGPFLVVAPLSVIPAWCDTFNNWAPDLNYVVYLGPEAAR
ANIREYELFIDGNPKKTKFNVLVTSYDYILADAETLKGIKWQVLAVDEAHRLKNRESQLY
YKLNSFGIPCRVLITGTPIQNNLAELSALLDFLNPGKVLIDEELELLSSADNKDATDEEQ
NEARRLKTQEKLRELHSAIAPFILRRTKETVESDLPPKTEKIIRVELSDVQLEYYKNILT
RNYAALRDASNGHKQSLLNIMMELKKVSNHPYMFQGAEERVLAGSTRREDQIKGLITSSG
KMMLLDQLLAKLKKDGHRVLIFSQMVKMLDILGDYLRVRGYQFQRLDGTIPAGPRRMAIN
HFNAEDSEDFCFLLSTRAGGLGINLMTADTVIIYDSDWNPQADLQAMARAHRIGQKKPVS
VYRLVAKQTIEEEVVNRARNKLFLEYLTIQAGVTDDGKALREQFKEKGLKIDEAKTAEDI
SMILKMRSQNLFEQSSNQEKLEQLDIDAILENAEVTKTDIDDKINLSSGGIDWDNWMQVT
DVKFDHMNLDWDQIIPAEELAAVKAEEEKKKHEEYLAKAMEESAPRKAALKGSKKNAESD
RADRLAKKRQREKQELEELEEQRALLSDPRRPLNEKETRNLIRAFFRYGFFEDREDEIVH
DARLSDRDHDFLKSIIDDLVAVSKQAVEANNERLREEEERAGKPLAKKDKKAVLVDFGEV
RKVNAETVVERPPQLRLLRRVLAEHGDVLSFRLPDASKAAQYTCEWGAREDGMLLVGINK
YGFGAWTQIRDDPELQMHDKFFLEEHRVDKKEERRRADDKGIQSPGAVHLVRRSEYLLSV
LMAKYSDDANAKKAVENHHRSKKLLTNGIRRGDTGSVSASPAPPMSKKPSQHRDRDHHRS
YSNANDRSTPRPDKRKYNDDYDDRGPKHRRLEAEGRQEKKPKDKERPKMDPETMERYKRD
RQRAVERFHELSKLRDDEIDSSDNTQLVWSVLRPLKANMERIMYSKERFPAAKERAKILG
EEIRTFGSFLQNLRAENGADLDSLEPQFWEFLSSIWPIGEVKVSGKRLQRMFGDLIEKDK
EKERLKREEERANELKRARNPDLEDGEIASDREERRPRDPYRDDRREERREERRDERRDD
RREEPRRRNYYEDGDRLNFYRHRRPENNRNVPLRHPSWQSRSPPARHSPY
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatccccagaccctggtccggtgaatggacacacctccccatcgccggacgaa
catagcacacacgtagcggacgccgcccaaagcaatagtcatctgtcagacacacagcct
tctggtgtcggtggcgcatctcccgactctgccgatgatgccggctccgcggatgatgag
ccggagttcgccccagatgagcaagacgacgcgtcccactcgagcgaacatgatgccccg
gacgatgcagatttcaacgaggaagacagccctgcctctgctcagagtaacgacgcgtct
gatcgacccgtgtcggcctcgaccgccccaaaacggaaagcggcccatatattagacgac
gaatacattcgggaaaacccagagttgtatggcttgagacgtagttcgcgtccttcgcaa
cgccgcaaggtggtggagtcggacggtgatgaagatgaatcagactctgatgttactccg
gcccgccgaaagtcgtcgaataagcgtcgccgcctcgagcgctctcagcccacttccaag
cgaggcacaccagcccgtcaaccatccgtcgacgattcggactccgatacgtacggtggc
gccaaggcccgcagcttccggaaaaaggttcggcggcaacaagagttacagcctacactg
gcgttggctgagaagcggtggtcgaaccgtcgggcggcccaggtctcagccggcgcctat
caagaaagcgacgtggatgacgaggaagaagacgaggttactcccggttactgggccgcc
gatttggaggataactcgccgtacattgagaagattctgcgccatcgccccaaggaaggc
gtcgaactctcacccgagtccacgcgccatgacttcgaatactacattaagtggcagggc
aagtcacatctccacaacacctgggagacaaccgaatccgtcgcagggttccgcggattt
cgccggctcgagaactacttcaagaagacggtagagtacgagctagacctgaagtttggt
ggtgatgaaatcagccccgagcaacgcgagcaatggctgctcgatcgagagcgggaagag
gaagctttggatgactacaccaaagtcgaacgcatcgtctccgttcgcgatggtgagaat
ggcatggaatattttgtcaagtggaaggggctccagtatgacgactgcacatgggaggat
gctgccctaatcagcagccatgcccaggacaaaatcgatcagttcttggaccggtcgacc
cgttcctggcagtctgatcggaagcaagcaaatctcgacactcgctcgaggatgacgaag
ttggagaaacaaccaccttacatcaaaggtggcgagctccgtgaattccaattgaagggc
ctcaatttccttgcactcaactggacgcgcggaaacaatgtcatcttggctgacgagatg
ggcctcggcaagacggtccaaactgtctccttcctcagctggctccgcaacgatcgtggt
caggaggggcctttccttgtcgtcgcacccctcagtgttattcccgcatggtgtgatact
ttcaacaactgggctccggatctcaactacgttgtctatctcggacccgaggcggctcgc
gccaacattagggagtatgagctcttcattgacgggaacccgaagaagaccaagttcaat
gttctggtcacctcttacgactatattctcgccgatgcggagactctcaaaggcatcaag
tggcaggttctcgctgttgatgaagcccatcgtctgaagaaccgcgagtctcagttgtat
tacaagctcaacagcttcgggattccctgcagggttctcatcactggcacgccaatccag
aataatcttgccgagttgtcagcacttctagacttcctcaacccagggaaagttctgatt
gacgaggagctcgagttgctctcgagtgccgataacaaggatgccacggacgaggaacaa
aatgaagccaggcgattgaagacccaggagaagcttcgggagttgcacagcgccattgcc
cccttcattttgcgcagaacaaaggagactgtcgagtcagacctaccacccaagactgaa
aagatcatccgtgtcgaactctcagatgtccaattggagtactacaagaacatcctcact
cggaattatgccgcccttcgcgatgccagcaacggccacaagcaatcgctgctcaatatc
atgatggagctgaagaaggtcagcaaccacccgtacatgtttcagggcgccgaagagcgt
gtactggctgggagcactcgtcgggaagaccaaatcaagggtctgatcacaagtagcggc
aaaatgatgctgctggaccagcttctcgccaagctcaaaaaggacggccatcgtgttttg
atcttcagtcagatggttaagatgctggacatcttgggtgattatcttcgtgttcgcggt
taccaatttcagcgattggacggcacgatccctgctggccctcgtcgtatggccatcaac
catttcaacgccgaggatagcgaagatttctgtttcctgctctccacaagagctggcggc
ctcggtatcaatctgatgactgcggacaccgtcatcatctacgactctgattggaatcct
caggccgatttgcaggcaatggcacgggctcaccgtattggacagaaaaagcctgttagc
gtgtatcggcttgttgctaagcagaccattgaggaagaagttgtcaaccgggcgcgtaat
aagcttttcctcgagtacctcaccatacaggccggtgtcacggacgatggcaaggccctc
cgcgagcagttcaaggagaagggtctgaagatcgacgaggcaaagactgccgaggatatt
tcgatgattctcaagatgcgttctcaaaacttgtttgagcagtcgagcaaccaggagaag
ctcgagcagctggacatcgacgcgattcttgagaatgccgaggtgacgaagaccgatatc
gatgacaagatcaacctcagcagcggcggtatcgattgggacaactggatgcaagtaacg
gatgtcaagttcgaccatatgaatctcgactgggatcagatcattcctgccgaagaactt
gcggccgtcaaggctgaagaggagaagaagaagcacgaggagtatctggccaaggctatg
gaagagagcgctccccgcaaggctgcgctgaagggttccaagaagaacgccgagtcagac
cgcgctgatcgccttgcgaagaagaggcaacgcgagaaacaggagctggaggagctggag
gagcaaagggcattgctctcagatccacgccgtcctcttaacgagaaggaaacgcgcaat
ttgattcgcgccttcttccgttacggcttcttcgaggaccgggaagacgaaattgttcac
gacgcccgcctaagcgaccgggaccacgatttcctcaagtcgatcatcgacgatcttgtc
gctgtgagcaaacaagcggtggaggccaataacgagagactgcgcgaagaagaggagagg
gcaggcaaacctctcgcgaaaaaggacaaaaaggccgtgctggttgattttggcgaggtt
cgcaaagtcaatgcggaaaccgttgttgaacgaccaccccagcttaggctcctacgccgt
gtgctcgccgagcatggcgacgtcttgtcattcagactaccagatgccagtaaagcagcg
caatatacctgcgaatggggcgcgcgcgaagatggcatgctgcttgtcggtatcaacaag
tacgggtttggggcctggacacagatcagggatgatcctgagctgcagatgcatgacaag
ttcttcttggaagagcaccgtgttgacaaaaaggaggaacgccggagggctgatgacaag
gggatacagtctcccggggcggttcatcttgtccgacggtccgagtacctcttgtcagtc
ctgatggccaagtactcagatgatgccaacgcgaagaaggcggtggaaaaccaccaccgg
agcaagaagctgttgacaaacgggatccgccgcggggacaccggttcggtctcggcgtct
ccggctccgcccatgtccaagaagccgagtcaacaccgtgaccgtgatcatcaccggtcc
tatagcaacgctaacgaccgcagcacgcctcggcctgacaagcgcaaatacaacgacgat
tacgatgatcgcggccctaaacaccgaagactcgaggctgagggtaggcaagagaagaag
cccaaggacaaggagcgaccgaaaatggacccggagactatggagagatacaagcgcgat
cgccaaagagcagttgaacgcttccatgagctgtcaaagttgcgtgacgacgagattgac
agctctgacaacacgcaactggtgtggtcagttctccggcctctcaaggcgaacatggag
cgcatcatgtactccaaggagaggtttccggctgcaaaggaacgggccaagatccttggc
gaggagatccgcacgttcggaagctttctccagaacctgcgagcggagaatggggccgac
cttgacagtttggaaccccagttctgggagttcctctcctcgatctggcccattggcgag
gtgaaggtctctggcaagcgacttcagaggatgtttggagacctcatcgaaaaggataaa
gaaaaggagaggttgaagcgagaggaggagcgagccaacgagctcaagcgtgcgagaaac
ccagacttggaggatggcgaaattgcgagcgatcgagaagaacgccgcccccgggaccct
taccgcgatgaccggcgtgaagagcgccgggaagagaggcgcgatgagaggagggacgac
cgaagagaggagcctcggcgtcgcaattactatgaggacggtgaccgcctcaacttttac
cgccaccgtcggccagagaacaacaggaatgttcctctccgacacccgtcgtggcaaagc
cggagcccaccagcccgccatagcccttattag
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integrated database retrieval system
